Overview of HPV Mutation, Integration-Cistrome Factor Overlap and Target gene

Human Papillomavirus Virus (HPV) is a DNA virus from the papillomavirus family. Over 170 types have been described. More than 40 types may be spread through sexual contact and infect the anus and genitals. People can become infected with more than one type of HPV. HPV affects only humans.
Size: ～7904 nucleotides [RefSeq: AF125673.1]
Encoding: E5, E6, E7, L1, L2 and so on
Human Disease: Infection with HPV can lead to Head and neck squamous cell carcinoma, Cervical carcinoma, etc. Click here to see all HPV associated human diseases.

Click the blue font on the page to view detailed information.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."

HPV Mutation Info

Click here to see all HPV Mutation Sites

ID	PMID	Mutation	Gene/Protein/Region	Description	Detail
1	32304786	I117F	L1	G R S I C	View
2	32304786	A137S	L1	G R S I C	View
3	32304786	N138K	L1	G R S I C	View
4	32304786	G140R	L1	G R S I C	View
5	32304786	N143K	L1	G R S I C	View
6	32304786	C146G	L1	G R S I C	View
7	32304786	S118C	L1	G R S I C	View
8	32304786	L119S	L1	G R S I C	View
9	32304786	T129S	L1	G R S I C	View
10	32304786	S133C	L1	G R S I C	View
11	32304786	S133T	L1	G R S I C	View
12	32304786	R258I	L1	G R S I C	View
13	32304786	V267L	L1	G R S I C	View
14	32304786	V267A	L1	G R S I C	View
15	32304786	E269A	L1	G R S I C	View
16	32304786	E269D	L1	G R S I C	View
17	32304786	Y291S	L1	G R S I C	View
18	32304786	T350S	L1	G R S I C	View
19	32304786	T354I	L1	G R S I C	View
20	32304786	K356Q	L1	G R S I C	View
21	32304786	K356T	L1	G R S I C	View
22	30008422	T3575G	E2	G R S I C	View
23	30008422	S274A	E2	G R S I C	View
24	30008422	T3517C	E2	G R S I C	View
25	30008422	T3566G	E2	G R S I C	View
26	30008422	G3778T	E2	G R S I C	View
27	30008422	T254 N	E2	G R S I C	View
28	30008422	F271V	E2	G R S I C	View
29	30008422	W341C	E2	G R S I C	View
30	27977741	Y59D	E7	G R S C	View
31	29393441	G3956A	E5	G R S C	View
32	27977741	Y55D	E7	G R S C	View
33	29393441	T3980A	E5	G R S C	View
34	27977741	T37I	E7	G R S C	View
35	29393441	T4052C	E5	G R S C	View
36	27070907	T5458C	L1	G R S C	View
37	27977741	L5S	L1	G R S C	View
38	29393441	A4064G	E5	G R S C	View
39	27070907	A5467C	L1	G R S C	View
40	29393441	A297G	E6	G R S C	View
41	27070907	C5496T	L1	G R S C	View
42	29393441	A301G	E6	G R S C	View
43	31138240	C706T	E7	G R S C	View
44	27070907	A5497C	L1	G R S C	View
45	28141822	T74A	E7	G R S C	View
46	29393441	T312C	E6	G R S C	View
47	31138240	C706A	E7	G R S C	View
48	27070907	G5503A	L1	G R S C	View
49	28141822	S29T	E7	G R S C	View
50	29393441	A475G	E6	G R S C	View
51	31138240	K93 N	E6	G R S C	View
52	27070907	C5505A	L1	G R S C	View
53	28141822	A45E	E7	G R S C	View
54	29393441	C626T	E7	G R S C	View
55	31138240	S29 T	E7	G R S C	View
56	27070907	G5521A	L1	G R S C	View
57	28141822	A45V	E7	G R S C	View
58	29393441	G695A	E7	G R S C	View
59	31138240	S74 T	E6	G R S C	View
60	27070907	A5560G	L1	G R S C	View
61	28141822	D76E	E7	G R S C	View
62	29393441	C737G	E7	G R S C	View
63	31138240	K35 N	E6	G R S C	View
64	27070907	A5563G	L1	G R S C	View
65	28141822	G41R	E7	G R S C	View
66	29393441	G580A	E7	G R S C	View
67	31186642	T137C	E6	G R S CI	View
68	27070907	A5573C	L1	G R S C	View
69	28141822	G63D	E7	G R S C	View
70	29393441	C670T	E7	G R S C	View
71	31186642	T369G	E6	G R S CI	View
72	27070907	G5581A	L1	G R S C	View
73	28141822	G63S	E7	G R S C	View
74	29393441	T6131A	L1	G R S C	View
75	31186642	C380T	E6	G R S CI	View
76	27070907	A5584G	L1	G R S C	View
77	28141822	K35N	E6	G R S C	View
78	29393441	A6840G	L1	G R S C	View
79	31186642	T410C	E6	G R S CI	View
80	27070907	T5619A	L1	G R S C	View
81	28141822	K93N	E6	G R S C	View
82	29393441	C6367T	L1	G R S C	View
83	31186642	G474A	E6	G R S CI	View
84	27070907	C5701G	L1	G R S C	View
85	28141822	Q113R	E6	G R S C	View
86	29393441	C6817A	L1	G R S C	View
87	27070907	G5775A	L1	G R S C	View
88	28141822	Q97L	E7	G R S C	View
89	29393441	N5D	E5	G R S C	View
90	27070907	C5875A	L1	G R S C	View
91	28141822	R145I	E6	G R S C	View
92	29393441	I48V	E5	G R S C	View
93	27070907	C5920T	L1	G R S C	View
94	28141822	R145K	E6	G R S C	View
95	29393441	P56A	E5	G R S C	View
96	27070907	A6430C	L1	G R S C	View
97	28141822	S74T	E6	G R S C	View
98	29393441	V64I	E5	G R S C	View
99	27070907	A6441C	L1	G R S C	View
100	28141822	T20I	E7	G R S C	View

HPV Overlap Info between Viral Integration Fragments and Cistrome Factors

Click to see statistics heatmap of VIS-Factor Overlap in the human genome of HPV

Click to see histogram of VIS-Factor Overlap by chromosome of HPV

Click to see the overlap count of three factors and HPV intergration fragments on the human chromosomes

Only show 100 info Click here to see all HPV Integration Sites

DVID	Chromosome	Histone Modification	Transcription Factor Binding Site	Chromatin Accessibility	Sum of Overlapped Records	Detail
5201955	chr1	3861	2799	1704	8364	View
5000052	chr1	3679	2585	1312	7576	View
5000050	chr1	3624	2491	1281	7396	View
5000039	chr1	2140	1554	1635	5329	View
5000094	chr1	1585	675	777	3037	View
5201742	chr1	654	1831	348	2833	View
5400052	chr1	634	1808	357	2799	View
5400429	chr1	2267	205	246	2718	View
5400824	chr1	714	1737	200	2651	View
5000092	chr1	2405	92	147	2644	View
5000103	chr1	217	1084	1023	2324	View
5401500	chr1	182	1127	987	2296	View
5201731	chr1	464	1550	274	2288	View
5000107	chr1	241	1043	970	2254	View
5000108	chr1	154	1056	981	2191	View
5000109	chr1	154	1054	981	2189	View
5000110	chr1	255	1012	905	2172	View
5000116	chr1	268	884	812	1964	View
5000130	chr1	11	772	784	1567	View
5400039	chr1	267	1016	208	1491	View
5400053	chr1	261	969	242	1472	View
5400051	chr1	397	871	62	1330	View
5000148	chr1	264	347	513	1124	View
5201839	chr1	147	768	115	1030	View
5201389	chr1	228	319	450	997	View
5000165	chr1	176	491	279	946	View
5000231	chr1	150	259	302	711	View
5000190	chr1	203	151	340	694	View
5000192	chr1	11	550	130	691	View
5401212	chr1	261	407	18	686	View
5401394	chr1	39	54	567	660	View
5000195	chr1	646	12	1	659	View
5000196	chr1	631	23	5	659	View
5201752	chr1	203	359	97	659	View
5300270	chr1	635	11		646	View
5000209	chr1	228	211	156	595	View
5000208	chr1	339	117	137	593	View
5402033	chr1	99	280	198	577	View
5000218	chr1	471	84	4	559	View
5402684	chr1	502	14	12	528	View
5401982	chr1	437	45	5	487	View
5000236	chr1	443	38	4	485	View
5404890	chr1	437	44	4	485	View
5404446	chr1	448	31	4	483	View
5000238	chr1	450	21	4	475	View
5000239	chr1	166	180	129	475	View
5404976	chr1	423	47	5	475	View
5500049	chr1	318	104	27	449	View
5000253	chr1	382	31	19	432	View
5000254	chr1	103	144	182	429	View
5000259	chr1	305	59	56	420	View
5400845	chr1	13	133	269	415	View
5000266	chr1	320	56	31	407	View
5200486	chr1	9	359	21	389	View
5404919	chr1	149	220	1	370	View
5000292	chr1	144	150	59	353	View
5402918	chr1	337	7		344	View
5404445	chr1	290	47	7	344	View
5201024	chr1	313	26	3	342	View
5000304	chr1	335	2	1	338	View
5000307	chr1	77	70	188	335	View
5000311	chr1	193	65	69	327	View
5201511	chr1	87	52	188	327	View
5000315	chr1	37	61	226	324	View
5404920	chr1	127	184	1	312	View
5000334	chr1	288	9		297	View
5000344	chr1	196	21	71	288	View
5403550	chr1	21	164	95	280	View
5000369	chr1	221	21	25	267	View
5000376	chr1	10	87	156	253	View
5000380	chr1	246	3		249	View
5404974	chr1	175	66	7	248	View
5000383	chr1	188	17	42	247	View
5402865	chr1	215	13	13	241	View
5200380	chr1	58	145	32	235	View
5300146	chr1	13	162	59	234	View
5000410	chr1	66	85	72	223	View
5000412	chr1	217	5		222	View
5000417	chr1	197	21	2	220	View
5402529	chr1	157	52	7	216	View
5404696	chr1	203	7	4	214	View
5000427	chr1	184	7	22	213	View
5402520	chr1	135	55	7	197	View
5000454	chr1	175	4	13	192	View
5200085	chr1	183	1	3	187	View
5000461	chr1	173	4	8	185	View
5000463	chr1	19	92	73	184	View
5401954	chr1	177	4		181	View
5300199	chr1	148	28	3	179	View
5402241	chr1	166	4		170	View
5000483	chr1	49	85	34	168	View
5402034	chr1	164	4		168	View
5000488	chr1	64	52	51	167	View
5401931	chr1	163	4		167	View
5201015	chr1	124	34	4	162	View
5400167	chr1	144	14	2	160	View
5000510	chr1	98	40	19	157	View
5200864	chr1	48	80	27	155	View
5400841	chr1	141	12	2	155	View
5201827	chr1	23	64	64	151	View

HPV Target Gene Info

Click to see correlation between gene expression and proportions of infiltrating immune cells of HPV

Only show 100 info Click here to see all HPV Target Gene

ID	Target gene	Virus	Gene Function	Literature Count	Detail
1	PTGDR	HPV	Suppressor gene	1	View
2	PRKN	HPV	Suppressor gene	1	View
3	RASSF2	HPV	Suppressor gene	2	View
4	ASXL1	HPV	Suppressor gene	2	View
5	GRIN2A	HPV	Suppressor gene	1	View
6	ANXA1	HPV	Suppressor gene	1	View
7	DAPK1	HPV	Suppressor gene	1	View
8	BLM	HPV	Suppressor gene	1	View
9	PACRG	HPV	Suppressor gene	1	View
10	DAPK2	HPV	Suppressor gene	1	View
11	OLFM4	HPV	Suppressor gene	1	View
12	ING4	HPV	Suppressor gene	1	View
13	LATS2	HPV	Suppressor gene	1	View
14	TSLP	HPV	Suppressor gene	1	View
15	EFNA5	HPV	Suppressor gene	1	View
16	ONECUT1	HPV	Suppressor gene	1	View
17	CTNNA2	HPV	Suppressor gene	1	View
18	DEUP1	HPV	Suppressor gene	1	View
19	AFAP1L2	HPV	Suppressor gene	1	View
20	HNF4A	HPV	Suppressor gene	1	View
21	MAP2K4	HPV	Suppressor gene	2	View
22	TFAP2A	HPV	Suppressor gene	1	View
23	CACNA2D3	HPV	Suppressor gene	2	View
24	OPCML	HPV	Suppressor gene	2	View
25	RB1CC1	HPV	Suppressor gene	2	View
26	CNTNAP2	HPV	Suppressor gene	6	View
27	MCPH1	HPV	Suppressor gene	1	View
28	BMP2	HPV	Suppressor gene	1	View
29	NEDD4L	HPV	Suppressor gene	1	View
30	WWOX	HPV	Suppressor gene	5	View
31	AMER1	HPV	Suppressor gene	1	View
32	CCAR1	HPV	Suppressor gene	1	View
33	CITED2	HPV	Suppressor gene	1	View
34	RBBP7	HPV	Suppressor gene	1	View
35	RBBP8	HPV	Suppressor gene	2	View
36	CCAR2	HPV	Suppressor gene	1	View
37	INPP4B	HPV	Suppressor gene	2	View
38	SYNPO2	HPV	Suppressor gene	3	View
39	PROX1	HPV	Suppressor gene	1	View
40	SMYD4	HPV	Suppressor gene	1	View
41	PIWIL2	HPV	Suppressor gene	1	View
42	CADM1	HPV	Suppressor gene	1	View
43	PTPN12	HPV	Suppressor gene	1	View
44	CADM2	HPV	Suppressor gene	3	View
45	PTPN13	HPV	Suppressor gene	2	View
46	DCC	HPV	Suppressor gene	2	View
47	LSAMP	HPV	Suppressor gene	1	View
48	ARID1A	HPV	Suppressor gene	1	View
49	EHF	HPV	Suppressor gene	1	View
50	RBL1	HPV	Suppressor gene	1	View
51	ATM	HPV	Suppressor gene	1	View
52	DNAJB4	HPV	Suppressor gene	1	View
53	DCDC2	HPV	Suppressor gene	1	View
54	ZNF292	HPV	Suppressor gene	1	View
55	BNIP3L	HPV	Suppressor gene	1	View
56	KDM3B	HPV	Suppressor gene	1	View
57	CLDN1	HPV	Suppressor gene	2	View
58	EXT1	HPV	Suppressor gene	2	View
59	ROBO1	HPV	Suppressor gene	2	View
60	EXT2	HPV	Suppressor gene	1	View
61	MTUS1	HPV	Suppressor gene	1	View
62	TGFBI	HPV	Suppressor gene	1	View
63	EXTL1	HPV	Suppressor gene	1	View
64	DUSP5	HPV	Suppressor gene	1	View
65	EXTL3	HPV	Suppressor gene	1	View
66	FOXA2	HPV	Suppressor gene	1	View
67	CLDN23	HPV	Suppressor gene	2	View
68	EPHA3	HPV	Suppressor gene	1	View
69	PGRMC2	HPV	Suppressor gene	1	View
70	CUL2	HPV	Suppressor gene	1	View
71	DCN	HPV	Suppressor gene	1	View
72	DUSP6	HPV	Suppressor gene	1	View
73	PTPRC	HPV	Suppressor gene	2	View
74	LEFTY2	HPV	Suppressor gene	1	View
75	KDM5A	HPV	Suppressor gene	1	View
76	IGF1	HPV	Suppressor gene	1	View
77	PTPRD	HPV	Suppressor gene	4	View
78	TGFBR3	HPV	Suppressor gene	1	View
79	KDM6A	HPV	Suppressor gene	2	View
80	KLK6	HPV	Suppressor gene	1	View
81	EYA4	HPV	Suppressor gene	1	View
82	ROR2	HPV	Suppressor gene	1	View
83	NUAK1	HPV	Suppressor gene	1	View
84	GSK3B	HPV	Suppressor gene	1	View
85	PRR5	HPV	Suppressor gene	1	View
86	APC	HPV	Suppressor gene	1	View
87	HECA	HPV	Suppressor gene	1	View
88	PTPRJ	HPV	Suppressor gene	1	View
89	RBM4	HPV	Suppressor gene	1	View
90	BATF2	HPV	Suppressor gene	1	View
91	CREBBP	HPV	Suppressor gene	1	View
92	UBE4B	HPV	Suppressor gene	1	View
93	IGF2R	HPV	Suppressor gene	1	View
94	ZFHX3	HPV	Suppressor gene	1	View
95	EPHB3	HPV	Suppressor gene	1	View
96	PLA2G2A	HPV	Suppressor gene	1	View
97	GADD45A	HPV	Suppressor gene	1	View
98	MINDY3	HPV	Suppressor gene	1	View
99	PTPRK	HPV	Suppressor gene	3	View
100	TCF4	HPV	Suppressor gene	2	View


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