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HPV VIS-Cistrome Factor Overlap in each human chromosome

This page provides a heatmap of three VIS-Factors overlap counts by chromosome to help users have a better understanding of the distribution of VIS-Factors overlap in the human genome.


HPV Overall Heatmap
CA: chromatin accessibility TFBS: transcription factor binding site HM: histone modification
Browse data distribution by Chromosome or Factor
*Please select the Chromosome or Factor you are interested in, the page will be automatically redirected.
 
 
VIS locations with VIS-cistrome overlap information and VIS details for each chromosome

Rank of Overlapped Records DVID Location HM TFBS CA Sum of Overlapped Records Detail
1 5404866 633956 3516 8986 1997 14499 View
2 5201955 40531689 3861 2799 1704 8364 View
3 5000039 78004934 2140 1554 1635 5329 View
4 5201742 10164 654 1831 348 2833 View
5 5400052 10185 634 1808 357 2799 View
6 5400429 8525334 2267 205 246 2718 View
7 5400824 10110 714 1737 200 2651 View
8 5000092 202967914 2405 92 147 2644 View
9 5000103 153572722 217 1084 1023 2324 View
10 5401500 150464545 182 1127 987 2296 View
11 5201731 10270 464 1550 274 2288 View
12 5000107 153572751 241 1043 970 2254 View
13 5000108 153572654 154 1056 981 2191 View
14 5000109 153572653 154 1054 981 2189 View
15 5000110 153572764 255 1012 905 2172 View
16 5000116 153572786 268 884 812 1964 View
17 5000130 66765143 11 772 784 1567 View
18 5400039 248945964 267 1016 208 1491 View
19 5400053 10368 261 969 242 1472 View
20 5400051 10024 397 871 62 1330 View
21 5000148 153572869 264 347 513 1124 View
22 5201839 248946218 147 768 115 1030 View
23 5201389 210222472 228 319 450 997 View
24 5000165 152871304 176 491 279 946 View
25 5000190 153572967 203 151 340 694 View
26 5000192 44092408 11 550 130 691 View
27 5401212 230872050 261 407 18 686 View
28 5401394 634432 39 54 567 660 View
29 5000195 28507325 646 12 1 659 View
30 5000196 28507426 631 23 5 659 View
31 5201752 234610430 203 359 97 659 View
32 5300270 150628338 635 11 646 View
33 5000209 173206904 228 211 156 595 View
34 5000208 173207107 339 117 137 593 View
35 5402033 111489922 99 280 198 577 View
36 5000218 7942005 471 84 4 559 View
37 5402684 10638420 502 14 12 528 View
38 5401982 121743397 437 45 5 487 View
39 5000236 121743387 443 38 4 485 View
40 5404890 121743392 437 44 4 485 View
41 5404446 121743380 448 31 4 483 View
42 5000238 121743365 450 21 4 475 View
43 5000239 173206844 166 180 129 475 View
44 5404976 121743401 423 47 5 475 View
45 5000253 204199214 382 31 19 432 View
46 5000254 629398 103 144 182 429 View
47 5000259 206817347 305 59 56 420 View
48 5400845 210792955 13 133 269 415 View
49 5000266 94426205 320 56 31 407 View
50 5200486 181359159 9 359 21 389 View
51 5404919 204195271 149 220 1 370 View
52 5000292 173206802 144 150 59 353 View
53 5402918 150577491 337 7 344 View
54 5404445 121743410 290 47 7 344 View
55 5201024 182677930 313 26 3 342 View
56 5000304 173113059 335 2 1 338 View
57 5000307 629408 77 70 188 335 View
58 5000311 15837232 193 65 69 327 View
59 5201511 231872628 87 52 188 327 View
60 5000315 42186258 37 61 226 324 View
61 5404920 204195224 127 184 1 312 View
62 5000334 28507697 288 9 297 View
63 5000344 15386220 196 21 71 288 View
64 5403550 91792709 21 164 95 280 View
65 5000369 10639225 221 21 25 267 View
66 5000376 198929931 10 87 156 253 View
67 5000380 121742509 246 3 249 View
68 5404974 78212000 175 66 7 248 View
69 5000383 15386182 188 17 42 247 View
70 5402865 50417046 215 13 13 241 View
71 5200380 208069276 58 145 32 235 View
72 5300146 65872520 13 162 59 234 View
73 5000410 230158228 66 85 72 223 View
74 5000412 43532674 217 5 222 View
75 5000417 15683626 197 21 2 220 View
76 5402529 121743417 157 52 7 216 View
77 5404696 243443606 203 7 4 214 View
78 5000427 15386149 184 7 22 213 View
79 5402520 121743471 135 55 7 197 View
80 5000454 15386119 175 4 13 192 View
81 5200085 81548768 183 1 3 187 View
82 5000461 15386072 173 4 8 185 View
83 5000463 166197278 19 92 73 184 View
84 5401954 121743083 177 4 181 View
85 5300199 52431303 148 28 3 179 View
86 5402241 121742964 166 4 170 View
87 5000483 204195703 49 85 34 168 View
88 5402034 121743005 164 4 168 View
89 5000488 83574911 64 52 51 167 View
90 5401931 121743001 163 4 167 View
91 5201015 234247971 124 34 4 162 View
92 5400167 84270972 144 14 2 160 View
93 5000510 87423599 98 40 19 157 View
94 5200864 224511452 48 80 27 155 View
95 5400841 179745091 141 12 2 155 View
96 5201827 216223685 23 64 64 151 View
97 5000529 31145806 57 26 65 148 View
98 5000531 15739881 11 130 7 148 View
99 5000537 174344622 108 12 26 146 View
100 5200742 183633431 137 8 1 146 View
101 5402548 121742765 146 146 View
102 5000539 207039850 93 20 32 145 View
103 5401499 150464289 12 125 8 145 View
104 5200760 222987700 16 119 9 144 View
105 5404655 100099177 11 127 138 View
106 5400321 61783531 132 1 3 136 View
107 5404417 183751541 132 4 136 View
108 5400562 114575637 14 118 3 135 View
109 5000562 15740011 8 122 4 134 View
110 5404604 221758568 36 82 16 134 View
111 5402472 42709184 78 48 6 132 View
112 5000580 193853629 91 34 4 129 View
113 5000598 107526237 12 104 8 124 View
114 5400566 160082924 115 7 122 View
115 5000628 87423538 86 20 9 115 View
116 5000632 109151868 48 66 114 View
117 5404685 229971925 56 57 1 114 View
118 5402663 191363672 26 76 11 113 View
119 5201286 200768356 93 17 1 111 View
120 5401836 25285108 9 81 19 109 View
121 5404358 37130790 6 103 109 View
122 5300501 245762902 70 29 8 107 View
123 5000674 219755366 4 95 5 104 View
124 5000675 172653333 22 32 50 104 View
125 5000686 174568959 12 87 3 102 View
126 5300045 57086051 11 72 17 100 View
127 5404868 168654321 41 10 49 100 View
128 5000702 43654426 81 18 99 View
129 5300044 57086063 11 67 17 95 View
130 5000733 173818755 81 8 4 93 View
131 5201975 89261626 62 25 6 93 View
132 5400565 121743546 34 52 7 93 View
133 5401771 25285090 9 71 13 93 View
134 5402541 79629684 49 27 16 92 View
135 5000746 179529964 33 10 48 91 View
136 5000748 9837196 86 4 90 View
137 5000750 150647789 84 5 1 90 View
138 5404455 44241490 15 71 3 89 View
139 5000781 101241881 51 12 22 85 View
140 5402471 42709143 54 31 85 View
141 5201147 56780713 27 46 11 84 View
142 5401983 227651740 83 83 View
143 5200348 6991888 78 2 2 82 View
144 5402378 108007594 43 18 20 81 View
145 5404691 18126807 17 39 25 81 View
146 5000821 112451351 55 12 12 79 View
147 5300368 209429677 75 2 2 79 View
148 5201406 229691900 54 24 78 View
149 5300367 209429658 74 2 2 78 View
150 5402249 60707001 61 9 8 78 View
151 5000837 121743562 18 52 7 77 View
152 5000840 236112750 8 69 77 View
153 5000882 114707215 68 5 73 View
154 5404452 184885678 53 13 7 73 View
155 5000900 112720080 69 1 70 View
156 5400165 31923621 61 9 70 View
157 5400339 150397526 23 44 3 70 View
158 5000906 33300664 56 9 4 69 View
159 5000907 193433961 65 4 69 View
160 5200956 224639978 30 35 3 68 View
161 5404716 197140385 1 8 59 68 View
162 5000936 32887969 60 7 67 View
163 5400387 161281398 36 25 6 67 View
164 5200411 56478727 64 2 66 View
165 5300174 44025282 42 22 1 65 View
166 5000954 147528525 52 4 8 64 View
167 5200214 14698540 31 20 13 64 View
168 5401928 16006653 58 6 64 View
169 5403463 53166594 59 5 64 View
170 5000967 66596363 49 14 63 View
171 5201777 108961787 53 10 63 View
172 5300370 209430831 61 1 62 View
173 5401334 210240241 23 29 10 62 View
174 5200284 198503541 54 7 61 View
175 5300369 209432024 45 16 61 View
176 5401090 212030290 57 4 61 View
177 5000998 163275093 53 5 2 60 View
178 5001002 171249777 41 13 6 60 View
179 5001006 66764111 54 6 60 View
180 5201115 203677877 28 3 29 60 View
181 5404444 239269086 23 28 9 60 View
182 5201984 181074197 56 2 58 View
183 5201490 19933057 32 25 57 View
184 5402919 206950242 57 57 View
185 5001039 183282431 32 19 5 56 View
186 5001040 198672023 21 17 18 56 View
187 5001047 51228171 51 1 3 55 View
188 5001050 228621574 53 2 55 View
189 5200140 244230906 54 1 55 View
190 5200312 111153557 54 1 55 View
191 5001066 222672314 22 32 54 View
192 5001070 114453053 44 10 54 View
193 5001078 10637488 41 13 54 View
194 5404513 29370983 33 20 1 54 View
195 5401634 240644730 14 14 25 53 View
196 5001097 38068174 40 7 5 52 View
197 5001101 65281384 51 1 52 View
198 5201232 76950675 26 6 20 52 View
199 5001135 192578097 49 49 View
200 5404702 92963372 49 49 View
201 5001149 164561569 48 48 View
202 5001156 239731574 13 6 28 47 View
203 5001159 216466150 14 33 47 View
204 5201090 4463084 41 4 2 47 View
205 5200928 36880257 40 6 46 View
206 5400175 162645943 6 3 37 46 View
207 5400110 116623561 44 1 45 View
208 5401134 246130951 25 6 13 44 View
209 5200105 60036285 25 11 7 43 View
210 5001236 50417792 41 1 42 View
211 5201600 225976498 20 10 12 42 View
212 5401624 31848017 40 2 42 View
213 5404372 214967164 38 4 42 View
214 5201924 611633 24 17 41 View
215 5400557 27463867 18 5 18 41 View
216 5001282 53162783 8 10 22 40 View
217 5001290 66763332 34 6 40 View
218 5201546 8601792 32 8 40 View
219 5201662 100405198 16 7 17 40 View
220 5200934 168211443 30 9 39 View
221 5201849 90525481 38 1 39 View
222 5403338 26740442 27 5 7 39 View
223 5404357 35494568 35 4 39 View
224 5001323 170625756 32 6 38 View
225 5001327 35194785 7 29 2 38 View
226 5001329 114378893 14 24 38 View
227 5402544 17040694 32 6 38 View
228 5001352 207323264 30 7 37 View
229 5001365 158859103 36 1 37 View
230 5001370 66763337 33 4 37 View
231 5001373 66763360 35 2 37 View
232 5400163 14735347 27 9 1 37 View
233 5400170 100525958 24 13 37 View
234 5001376 22055836 33 3 36 View
235 5001389 15807460 4 22 10 36 View
236 5200287 198698079 3 33 36 View
237 5200663 3692176 25 11 36 View
238 5201486 92343164 3 30 3 36 View
239 5201690 86352688 30 6 36 View
240 5400166 66742756 28 8 36 View
241 5402090 247278928 36 36 View
242 5001401 216466079 13 22 35 View
243 5001410 155968193 23 9 3 35 View
244 5400032 88454881 11 17 7 35 View
245 5401062 217790575 27 8 35 View
246 5402808 22184605 31 4 35 View
247 5403806 114005556 34 1 35 View
248 5403931 166027754 33 2 35 View
249 5404840 225243364 22 10 3 35 View
250 5001427 58246622 10 23 1 34 View
251 5001460 47901408 15 11 7 33 View
252 5001462 216461684 9 11 13 33 View
253 5001469 173271160 1 28 4 33 View
254 5001473 66763478 33 33 View
255 5403498 936357 30 3 33 View
256 5404307 200995960 4 29 33 View
257 5400322 238764471 32 32 View
258 5402032 24425071 29 3 32 View
259 5500076 155188351 21 11 32 View
260 5001488 184167493 5 9 17 31 View
261 5200463 62367554 22 9 31 View
262 5200980 19200588 27 4 31 View
263 5401106 180463251 29 2 31 View
264 5402832 9485376 27 4 31 View
265 5001507 11738626 29 1 30 View
266 5001508 53920479 12 18 30 View
267 5001512 232886724 21 5 4 30 View
268 5201494 246982676 30 30 View
269 5300094 44100429 16 14 30 View
270 5300095 44088908 17 10 3 30 View
271 5401128 24297544 18 5 7 30 View
272 5405007 67563805 29 1 30 View
273 5001547 73095524 28 1 29 View
274 5400249 65303723 26 3 29 View
275 5400386 108160022 15 13 1 29 View
276 5401129 81748396 23 6 29 View
277 5403492 176690300 16 13 29 View
278 5500078 54537571 25 4 29 View
279 5001564 35590086 17 9 2 28 View
280 5001578 54381767 11 16 1 28 View
281 5001582 83837783 26 2 28 View
282 5400172 113384437 22 6 28 View
283 5405006 205248149 28 28 View
284 5500035 37887353 27 1 28 View
285 5001617 170425724 22 5 27 View
286 5001633 89905754 10 11 5 26 View
287 5001646 99614345 21 3 2 26 View
288 5001654 116482065 4 12 10 26 View
289 5300423 205307974 21 3 2 26 View
290 5400540 204179666 21 5 26 View
291 5001685 3964560 11 14 25 View
292 5001686 216466015 10 15 25 View
293 5001692 180268129 5 10 10 25 View
294 5001699 191365282 12 9 4 25 View
295 5200949 195196910 22 3 25 View
296 5400169 98294968 14 11 25 View
297 5402484 245623065 22 3 25 View
298 5402662 191365285 12 9 4 25 View
299 5500087 61094894 4 17 4 25 View
300 5001720 42237911 20 4 24 View
301 5001721 219634229 20 3 1 24 View
302 5001743 191365292 12 8 4 24 View
303 5201273 60303653 9 9 6 24 View
304 5400101 228684167 22 2 24 View
305 5400178 199193985 15 9 24 View
306 5404299 43527452 21 2 1 24 View
307 5404461 112439276 21 1 2 24 View
308 5404940 181017387 16 7 1 24 View
309 5001758 242345524 23 23 View
310 5001780 66770382 16 1 6 23 View
311 5001781 66770385 16 1 6 23 View
312 5001785 66764212 22 1 23 View
313 5200384 160425039 23 23 View
314 5201190 5010314 20 1 2 23 View
315 5201303 236336934 7 13 3 23 View
316 5402698 106660434 22 1 23 View
317 5403019 29234158 23 23 View
318 5001816 164563828 10 12 22 View
319 5001822 66770393 15 1 6 22 View
320 5200625 54274894 15 7 22 View
321 5300222 190315897 2 18 2 22 View
322 5300498 214293019 22 22 View
323 5400173 118423202 18 2 2 22 View
324 5400840 167763094 16 5 1 22 View
325 5403457 235590089 7 4 11 22 View
326 5201728 611841 13 8 21 View
327 5400168 96479967 12 8 1 21 View
328 5401930 108824833 21 21 View
329 5001868 84448842 8 12 20 View
330 5001872 80654293 18 2 20 View
331 5001889 228201698 15 5 20 View
332 5201037 20926521 13 6 1 20 View
333 5201945 119616669 19 1 20 View
334 5300389 171636926 2 17 1 20 View
335 5402234 190442656 9 9 2 20 View
336 5402498 145868441 1 7 12 20 View
337 5404354 56471325 12 8 20 View
338 5404601 46266387 20 20 View
339 5404675 209684599 3 17 20 View
340 5001914 231246659 9 8 2 19 View
341 5001923 213938993 2 16 1 19 View
342 5001924 222423803 16 3 19 View
343 5001939 166491120 13 6 19 View
344 5201517 81028098 12 7 19 View
345 5300149 13606311 8 11 19 View
346 5404705 43164005 18 1 19 View
347 5001986 48882226 4 2 12 18 View
348 5001989 85777479 17 1 18 View
349 5002000 66770541 12 3 3 18 View
350 5201086 147869985 12 6 18 View
351 5300148 13606269 9 9 18 View
352 5300234 200759767 13 1 4 18 View
353 5401329 17852367 12 3 3 18 View
354 5401503 150497042 18 18 View
355 5404697 236678452 17 1 18 View
356 5002024 32664397 12 3 2 17 View
357 5002025 234989873 12 5 17 View
358 5002039 156302964 7 8 2 17 View
359 5002055 55021287 17 17 View
360 5002058 66765559 6 10 1 17 View
361 5201180 96489347 17 17 View
362 5201200 180113735 4 7 6 17 View
363 5201466 59890263 17 17 View
364 5300147 13586443 14 3 17 View
365 5400174 158207567 8 9 17 View
366 5400353 14635624 17 17 View
367 5400564 121413709 16 1 17 View
368 5401510 222215057 3 14 17 View
369 5401633 211770955 14 3 17 View
370 5402539 66805089 5 11 1 17 View
371 5402672 38022692 15 2 17 View
372 5404564 237843748 16 1 17 View
373 5500017 160353247 6 1 10 17 View
374 5500079 183574502 4 3 10 17 View
375 5002070 112907258 9 7 16 View
376 5002077 239974109 16 16 View
377 5002090 187350149 5 6 5 16 View
378 5002093 20273874 4 12 16 View
379 5002107 173239785 15 1 16 View
380 5002110 66770579 11 2 3 16 View
381 5200409 230322866 12 4 16 View
382 5200976 63999703 14 2 16 View
383 5201997 162892338 14 2 16 View
384 5300233 200759783 11 1 4 16 View
385 5400568 231638130 14 2 16 View
386 5401281 60878099 10 2 4 16 View
387 5402860 4959271 16 16 View
388 5402862 161759178 11 5 16 View
389 5404469 82894089 7 8 1 16 View
390 5404828 77917489 15 1 16 View
391 5002142 176061838 14 1 15 View
392 5002143 2962602 14 1 15 View
393 5002148 192607156 13 2 15 View
394 5201372 227633785 11 4 15 View
395 5400842 186663923 11 4 15 View
396 5401333 179184882 15 15 View
397 5401506 182980078 13 1 1 15 View
398 5401628 112601990 14 1 15 View
399 5002177 186873004 14 14 View
400 5002187 178807053 7 7 14 View
401 5002200 216461895 11 2 1 14 View
402 5002201 216461916 11 2 1 14 View
403 5002224 15812069 3 6 5 14 View
404 5202015 80933330 7 6 1 14 View
405 5400248 18723475 8 5 1 14 View
406 5400571 246630770 14 14 View
407 5401133 173765152 14 14 View
408 5401336 237790933 7 7 14 View
409 5401493 32298161 8 3 3 14 View
410 5401494 70945133 3 11 14 View
411 5402985 15037251 12 2 14 View
412 5404458 58399019 7 7 14 View
413 5002242 28564160 3 6 4 13 View
414 5002286 4276734 13 13 View
415 5002288 11108441 13 13 View
416 5002294 45176897 9 4 13 View
417 5002295 114714724 7 6 13 View
418 5300050 97527995 8 5 13 View
419 5400828 55602624 12 1 13 View
420 5401209 110110384 13 13 View
421 5401508 191018539 11 2 13 View
422 5401626 59140464 12 1 13 View
423 5401929 107101723 4 9 13 View
424 5404514 95396346 11 1 1 13 View
425 5404530 94675000 5 8 13 View
426 5404541 152947287 13 13 View
427 5002312 209369971 12 12 View
428 5002315 219902901 10 2 12 View
429 5002323 43973531 12 12 View
430 5002335 156670370 4 8 12 View
431 5002338 114714749 6 6 12 View
432 5002362 27946897 3 6 3 12 View
433 5002374 114714783 6 6 12 View
434 5002378 197580202 2 10 12 View
435 5200549 171204697 10 2 12 View
436 5200912 227985037 1 10 1 12 View
437 5201532 118667223 11 1 12 View
438 5400844 205327726 11 1 12 View
439 5400847 223829819 3 8 1 12 View
440 5401495 72252205 11 1 12 View
441 5401622 23258821 11 1 12 View
442 5401631 183378901 10 2 12 View
443 5404796 88470302 11 1 12 View
444 5002425 15328007 10 1 11 View
445 5002439 96447970 5 6 11 View
446 5002444 8807334 9 1 1 11 View
447 5002467 114692574 11 11 View
448 5002477 203635123 11 11 View
449 5002495 15740088 4 7 11 View
450 5300444 171591329 11 11 View
451 5400177 190646838 8 3 11 View
452 5400354 114381155 9 2 11 View
453 5400371 22551204 11 11 View
454 5400569 233436942 10 1 11 View
455 5401507 184829540 5 6 11 View
456 5401630 174088317 7 4 11 View
457 5402170 68394053 8 3 11 View
458 5404622 244632944 10 1 11 View
459 5404902 171317171 10 1 11 View
460 5500082 148585206 10 1 11 View
461 5002513 15328034 9 1 10 View
462 5002519 17809911 8 2 10 View
463 5002523 15748495 10 10 View
464 5002541 205525558 5 5 10 View
465 5002558 203005157 1 9 10 View
466 5200167 248270621 9 1 10 View
467 5200528 229150533 9 1 10 View
468 5200612 168119021 1 4 5 10 View
469 5200666 183366271 7 3 10 View
470 5200703 15113581 2 5 3 10 View
471 5300004 77439357 6 3 1 10 View
472 5300145 52399825 6 4 10 View
473 5300321 190744217 9 1 10 View
474 5400017 187632458 9 1 10 View
475 5400826 38507577 9 1 10 View
476 5401131 98558442 10 10 View
477 5401132 164584661 6 4 10 View
478 5402145 202978377 10 10 View
479 5402445 109137214 10 10 View
480 5402825 110745042 9 1 10 View
481 5404336 90407743 3 7 10 View
482 5404729 114225310 3 7 10 View
483 5002606 206166879 9 9 View
484 5002611 164782807 8 1 9 View
485 5002612 15327982 8 1 9 View
486 5002613 15328057 8 1 9 View
487 5002631 114714815 5 4 9 View
488 5002639 51255968 5 4 9 View
489 5002640 98685477 9 9 View
490 5002641 194428666 9 9 View
491 5002650 164438084 8 1 9 View
492 5002658 3130151 7 2 9 View
493 5002667 52714108 7 2 9 View
494 5002680 191362330 9 9 View
495 5002685 10647374 5 4 9 View
496 5200397 166958829 6 3 9 View
497 5200450 223317002 7 2 9 View
498 5200641 63898486 4 5 9 View
499 5201009 230678760 8 1 9 View
500 5300091 44079307 7 2 9 View
501 5300307 245660385 9 9 View
502 5400430 228553798 8 1 9 View
503 5400559 71156503 9 9 View
504 5400560 85053384 1 8 9 View
505 5400830 62591316 7 2 9 View
506 5401492 23270707 8 1 9 View
507 5401496 150452363 4 4 1 9 View
508 5402144 159857622 6 3 9 View
509 5402321 108812429 7 2 9 View
510 5402983 31642073 9 9 View
511 5404529 202608296 7 2 9 View
512 5404748 39585023 6 3 9 View
513 5002696 15328124 7 1 8 View
514 5002715 234416735 8 8 View
515 5002718 114714891 6 2 8 View
516 5002725 194793383 4 2 2 8 View
517 5002739 220753414 8 8 View
518 5002745 214153327 7 1 8 View
519 5002747 31106002 7 1 8 View
520 5002766 202513083 2 6 8 View
521 5002772 176460136 5 3 8 View
522 5002784 173239641 8 8 View
523 5002788 66768650 7 1 8 View
524 5200158 96594125 7 1 8 View
525 5200656 57852572 6 2 8 View
526 5201916 240716975 4 4 8 View
527 5400164 21191792 7 1 8 View
528 5400345 201291197 7 1 8 View
529 5404297 232798958 4 2 2 8 View
530 5500098 10336640 1 7 8 View
531 5002806 15328159 6 1 7 View
532 5002807 15328184 6 1 7 View
533 5002808 15328225 6 1 7 View
534 5002819 62254243 4 3 7 View
535 5002827 201231439 2 5 7 View
536 5002831 114662994 4 3 7 View
537 5002832 114714860 5 2 7 View
538 5002876 114714918 6 1 7 View
539 5002919 66764406 6 1 7 View
540 5200330 212594296 5 2 7 View
541 5201345 154910500 7 7 View
542 5201571 178763169 6 1 7 View
543 5201944 246358273 2 5 7 View
544 5300035 85909191 7 7 View
545 5300197 55176161 7 7 View
546 5400839 162864113 5 2 7 View
547 5401502 150480567 7 7 View
548 5401509 202079310 7 7 View
549 5401840 171024936 7 7 View
550 5402184 237428404 6 1 7 View
551 5403421 23315316 2 5 7 View
552 5404525 157381759 5 1 1 7 View
553 5404645 227737809 4 3 7 View
554 5404813 78905963 7 7 View
555 5002955 18164185 5 1 6 View
556 5002959 186542449 6 6 View
557 5002969 51662642 6 6 View
558 5002970 226794539 5 1 6 View
559 5002971 243418077 6 6 View
560 5002999 147261677 6 6 View
561 5003019 199695567 4 2 6 View
562 5003047 230595276 3 3 6 View
563 5200814 165010286 4 2 6 View
564 5201350 210190277 3 3 6 View
565 5201606 161783708 2 4 6 View
566 5201696 38664488 6 6 View
567 5201818 128783 2 4 6 View
568 5300001 49883899 2 4 6 View
569 5300092 44082661 6 6 View
570 5400833 92533630 1 5 6 View
571 5400843 200829928 5 1 6 View
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View VIS-VM Association

View the association between Viral Integration Sequence (VIS) and Virus Mutation (VM) in HPV

Contents
Description
VIS-Cistrome factor overlapping Description

The overlaps between integration site and cistrome are retrieved by genome search engine GIGGLE (Ryan M Layer et al. 2018). We built three indexs including histone modification, transcription factor binding site and chromatin accessibility, then we searched the significance of shared genomic loci (overlaps) between query VIS and Cistrome (Rongbin Zheng et al. 2019) genome interval files. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount could indicate that the virus integration site is a potentially functional DNA element.

  • HPV Overall Heatmap

This heatmap is an overall statistics for HPV VIS-Cistrome factor overlapped records by chromosome. The darker the red, the greater the overlapped records number. The user can view specific number by moving mouse pointer.

  • Browse data by Chromosome or Factor

The user can browse HPV VIS-Cistrome factor overlapped records data by specific chromosome or statistics histogram for specific Cistrome factor when users click the chromosome or Cistrome factor the user are interested in.

  • VIS locations with VIS-cistrome overlap information and VIS details for each chromosome

This table showed the VIS locations with VIS-cistrome overlap information and VIS details for each chromosome, you can click green button with number which indicates the overlapped records of this VIS and 3 cistrome factor (histone modification, transcription factor binding site and chromatin accessibility) to inspect details of cistrome sample and factor information, you can click "Detail" button to inspect other information of this VIS.