Overview of HTLV1 Mutation, Integration-Cistrome Factor Overlap and Target gene

Human T-cell Lymphotropic Virus Type-1 (HTLV1), or human T-lymphotropic virus type 1, also called the adult T-cell lymphoma virus type 1, is a retrovirus of the human T-lymphotropic virus (HTLV) family that has been implicated in several kinds of diseases including very aggressive adult T-cell lymphoma (ATL), HTLV-I-associated myelopathy, uveitis, Strongyloides stercoralis hyper-infection and some other diseases.
Size: ～9034 nucleotides [RefSeq: AB513134]
Encoding: CA, Tax, Gp46, Rex, 5′LTR, 3′LTR and so on
Human Disease: Infection with HBV can lead to Adult T cell leukemia/lymphoma, etc. Click here to see all HTLV1 associated human diseases

Click the blue font on the page to view detailed information.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."

HTLV1 Mutation Info

Only show 100 info Click here to see all HTLV1 Mutation Sites

ID	PMID	Mutation	Gene/Protein/Region	Description	Detail
1	22947305	G232A	5′LTR	R S CI C	View
2	22947305	A184G	5′LTR	R S CI C	View
3	28420387	T5237C	Env	R S C	View
4	17067264	G8231A	Tax	R S C	View
5	17067264	C7982T	Tax	R S C	View
6	17067264	C7920T	Tax	R S C	View
7	17067264	C7401T	Tax	R S C	View
8	17067264	T7914C	Tax	R S C	View
9	28420387	A149T	P30	R S C	View
10	28420387	A3963T	Pol	R S C	View
11	28420387	A7247G	HBZ	R S C	View
12	28420387	A7247G	P30	R S C	View
13	28420387	C5593A	Env	R S C	View
14	28420387	C6903T	P12	R S C	View
15	28420387	C7962T	Tax	R S C	View
16	28420387	D140G	P30	R S C	View
17	28420387	F19L	Env	R S C	View
18	28420387	G7273A	P30	R S C	View
19	28420387	G8211A	Tax	R S C	View
20	28420387	H137Q	Env	R S C	View
21	28420387	S304N	Env	R S C	View
22	28420387	L27R	P30	R S C	View
23	28420387	P23S	P12	R S C	View
24	28420387	Q323H	Pol	R S C	View
25	26472535	151Delta11	5′LTR	R S C	View
26	26472535	T345C	5′LTR	R S C	View
27	26472535	T301C	5′LTR	R S C	View
28	26472535	T301A	5′LTR	R S C	View
29	26472535	A298G	5′LTR	R S C	View
30	26472535	C268T	5′LTR	R S C	View
31	26472535	C219T	5′LTR	R S C	View
32	28420387	A221V	HBZ	R S C	View
33	25830656	L55P	Gp46	R S C	View
34	28420387	S13P	HBZ	R S C	View
35	26472535	C219G	5′LTR	R S C	View
36	26472535	C215T	5′LTR	R S C	View
37	26472535	A207G	5′LTR	R S C	View
38	26472535	G199A	5′LTR	R S C	View
39	26472535	C167T	5′LTR	R S C	View
40	26472535	T165C	5′LTR	R S C	View
41	26472535	G153A	5′LTR	R S C	View
42	23800288	P34L	P12	R S C	View
43	23800288	C336T	HBZ	R S C	View
44	23800288	C101T	HBZ	R S C	View
45	28420387	T6908G	P30	R S C	View
46	23800288	T95I	HBZ	R S C	View
47	23800288	S9P	HBZ	R S C	View
48	23800288	R112C	HBZ	R S C	View
49	23800288	Y477H	Gp21	R S C	View
50	33835501	K184R	HBZ	R S C	View
51	33835501	I164V	HBZ	R S C	View
52	33835501	C585T	HBZ	R S C	View
53	33835501	R119Q	HBZ	R S C	View
54	33835501	P65L	HBZ	R S C	View
55	33835501	V15M	HBZ	R S C	View
56	33835501	T77C	HBZ	R S C	View
57	33835501	T138C	HBZ	R S C	View
58	33835501	G434A	HBZ	R S C	View
59	33835501	C272T	HBZ	R S C	View
60	22449200	C7401T	Tax	S C	View
61	22449200	C7920T	Tax	S C	View
62	22449200	C7982T	Tax	S C	View
63	22449200	G8231A	Tax	S C	View
64	22449200	T7914C	Tax	S C	View
65	26516904	G8392A	3′LTR	S C	View
66	26516904	G8391A	3′LTR	S C	View
67	26516904	G8381A	3′LTR	S C	View
68	26516904	G8295A	3′LTR	S C	View
69	26516904	G7431A	Tax	S C	View
70	26516904	C8718T	3′LTR	S C	View
71	26516904	C8665T	3′LTR	S C	View
72	26516904	C8606G	3′LTR	S C	View
73	26516904	C8606A	3′LTR	S C	View
74	26516904	C8420T	3′LTR	S C	View
75	26516904	C8367A	3′LTR	S C	View
76	26516904	C7933T	Tax	S C	View
77	26516904	C7398T	Tax	S C	View
78	22449200	A8367C	Tax	S C	View
79	22449200	A2661V	Tax	S C	View
80	22449200	S2744N	Tax	S C	View
81	22449200	C7410A	Tax	S C	View
82	22449200	G7431A	Tax	S C	View
83	22449200	T7476C	Tax	S C	View
84	22449200	G7527A	Tax	S C	View
85	26516904	C7383T	Tax	S C	View
86	26516904	A8828G	3′LTR	S C	View
87	26516904	A8509G	3′LTR	S C	View
88	22449200	A8288G	Tax	S C	View
89	22449200	A8002G	Tax	S C	View
90	22449200	C8066G	Tax	S C	View
91	22449200	A8109G	Tax	S C	View
92	22449200	G8128A	Tax	S C	View
93	33539355	L19F	Gp46	S CI C	View
94	22449200	C8184T	Tax	S C	View
95	22449200	C8191T	Tax	S C	View
96	22449200	T8232C	Tax	S C	View
97	26472535	G126C	5′LTR	S C	View
98	26472535	G306A	5′LTR	S C	View
99	26472535	G126T	5′LTR	S C	View
100	26472535	G306C	5′LTR	S C	View

HTLV1 Overlap Info between Viral Integration Fragments and Cistrome Factors

Click to see statistics heatmap of VIS-Factor Overlap in the human genome of HTLV1

Click to see histogram of VIS-Factor Overlap by chromosome of HTLV1

Click to see the overlap count of three factors and HTLV1 intergration fragments on the human chromosomes

Only show 100 info Click here to see all HTLV1 Integration Sites

DVID	Chromosome	Histone Modification	Transcription Factor Binding Site	Chromatin Accessibility	Sum of Overlapped Records	Detail


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