HPV Target gene Detail Information

> SYNPO2 Gene Search Result

Gene Information

Gene Name	SYNPO2
Gene ID	171024
Gene Full Name	synaptopodin 2
Transcripts	ENSG00000172403
Virus	HPV
Gene Type	protein coding
HPA Location Info	Actin filaments;Vesicles;
HPA Protein Class Info	Predicted intracellular proteins
Gene Function	Suppressor gene
Uniport_ID	Q9UMS6
HGNC ID	HGNC:17732
VEGA ID	OTTHUMG00000161165
String ID	9606.ENSP00000306015
PharmGKB ID	PA38244

Target gene [SYNPO2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5001526	chr4	28	2		30	View
5002167	chr4	3	2	10	15	View
5401149	chr4	3		5	8	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).