HPV Target gene Detail Information

> SMARCC1 Gene Search Result

Gene Information

Gene Name	SMARCC1
Gene ID	6599
Gene Full Name	SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1
Gene Alias	Rsc8; SRG3; SWI3; BAF155; CRACC1
Transcripts	ENSG00000173473
Virus	HPV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins, Transcription factors
Gene Function	Suppressor gene
Uniport_ID	Q92922
HGNC ID	HGNC:11104
VEGA ID	OTTHUMG00000133519
OMIM ID	601732
String ID	9606.ENSP00000254480
PharmGKB ID	PA35954

Target gene [SMARCC1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5402451	chr3	6			6	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).