HPV Target gene Detail Information

> PCDH8 Gene Search Result


Gene Information
Gene Name PCDH8
Gene ID 5100
Gene Full Name protocadherin 8
Gene Alias PAPC; ARCADLIN
Transcripts ENSG00000136099
Virus HPV
Gene Type protein coding
HPA Location Info Golgi apparatus;Cytosol;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Plasma proteins, Predicted membrane proteins
Gene Function Suppressor gene
Uniport_ID O95206
HGNC ID HGNC:8660
VEGA ID OTTHUMG00000016979
OMIM ID 603580
String ID 9606.ENSP00000367177
PharmGKB ID PA33007
Target gene [PCDH8] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5404236 chr13 40 2 42 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).