HTLV1 Target gene Detail Information

> LSAMP Gene Search Result

Gene Information

Gene Name	LSAMP
Gene ID	4045
Gene Full Name	limbic system associated membrane protein
Gene Alias	LAMP; IGLON3
Transcripts	ENSG00000185565
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Cytosol;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins
Gene Function	Suppressor gene
Uniport_ID	Q13449
HGNC ID	HGNC:6705
VEGA ID	OTTHUMG00000159308
OMIM ID	603241
String ID	9606.ENSP00000419000
PharmGKB ID	PA30470

Target gene [LSAMP] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6023196	chr3	4			4	View
6025134	chr3	3			3	View
6026954	chr3	2			2	View
6026955	chr3	2			2	View
6028783	chr3		1		1	View
6029956	chr3	1			1	View
6033315	chr3				0	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).