HTLV1 Target gene Detail Information

> LRIG1 Gene Search Result


Gene Information
Gene Name LRIG1
Gene ID 26018
Gene Full Name leucine rich repeats and immunoglobulin like domains 1
Gene Alias LIG1; LIG-1
Transcripts ENSG00000144749
Virus HTLV1
Gene Type protein coding
HPA Location Info Cytosol;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins
Gene Function Suppressor gene
Uniport_ID Q96JA1
HGNC ID HGNC:17360
VEGA ID OTTHUMG00000158727
OMIM ID 608868
String ID 9606.ENSP00000273261
PharmGKB ID PA38450
Target gene [LRIG1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6002368 chr3 72 35 143 250 View
6002391 chr3 72 33 142 247 View
6002392 chr3 72 33 142 247 View
6002761 chr3 8 67 136 211 View
6017661 chr3 8 2 10 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).