HIV VIS-Cistrome Factor Overlap in each human chromosome

This page provides a heatmap of three VIS-Factors overlap counts by chromosome to help users have a better understanding of the distribution of VIS-Factors overlap in the human genome.


HIV Overall Heatmap
CA: chromatin accessibility TFBS: transcription factor binding site HM: histone modification
Browse data distribution by Chromosome or Factor
*Please select the Chromosome or Factor you are interested in, the page will be automatically redirected.
 
 
VIS locations with VIS-cistrome overlap information and VIS details for each chromosome

Rank of Overlapped Records DVID Location HM TFBS CA Sum of Overlapped Records Detail
1 4500020 89843535 3317 1850 1137 6304 View
2 4000024 180501926 2302 115 5 2422 View
3 4000044 147072888 1187 134 359 1680 View
4 4000049 8510541 1078 96 442 1616 View
5 4000072 150604427 1205 97 13 1315 View
6 4000079 15966181 430 382 448 1260 View
7 4000088 151400606 1162 11 1173 View
8 4000090 1318362 119 473 573 1165 View
9 4000094 84090844 932 66 146 1144 View
10 4000122 151680621 763 75 151 989 View
11 4000141 31855695 237 322 356 915 View
12 4000143 150875458 882 18 900 View
13 4000152 228501578 792 58 21 871 View
14 4000153 31985445 700 81 84 865 View
15 4000155 201022722 855 5 2 862 View
16 4000179 53837092 664 101 46 811 View
17 4000196 117535027 75 432 253 760 View
18 4000199 15579411 594 67 94 755 View
19 4000201 67833836 498 132 122 752 View
20 4000231 31911254 106 505 73 684 View
21 4000245 153881521 560 18 73 651 View
22 4000246 40268000 33 271 347 651 View
23 4000255 89693192 430 123 84 637 View
24 4000259 156262751 252 205 176 633 View
25 4000262 198576320 202 280 144 626 View
26 4000284 39266417 7 489 96 592 View
27 4000295 32789398 190 208 177 575 View
28 4000305 89299862 334 149 78 561 View
29 4000329 28986395 409 66 55 530 View
30 4000333 113805148 231 174 124 529 View
31 4000360 2578914 477 33 8 518 View
32 4000363 8630024 259 98 158 515 View
33 4000385 28928466 347 97 54 498 View
34 4000414 110214635 11 426 45 482 View
35 4000426 26123511 170 140 161 471 View
36 4000438 121743313 449 11 3 463 View
37 4000452 155695170 257 125 72 454 View
38 4000472 184002002 392 31 15 438 View
39 4000488 8533804 410 9 10 429 View
40 4000504 155529506 379 29 8 416 View
41 4000513 12356629 172 56 179 407 View
42 4000514 113769317 321 66 20 407 View
43 4000518 154213414 59 129 216 404 View
44 4000534 27445513 318 48 23 389 View
45 4000556 35943038 254 51 68 373 View
46 4000570 150621510 228 123 14 365 View
47 4000577 1309564 329 33 1 363 View
48 4000608 26120544 327 14 3 344 View
49 4000609 28029083 237 23 83 343 View
50 4000639 31027933 317 18 335 View
51 4000653 43345294 5 230 96 331 View
52 4000659 15571346 313 14 1 328 View
53 4000695 153842340 81 155 78 314 View
54 4000714 209704556 178 32 97 307 View
55 4000734 205611308 102 136 61 299 View
56 4500019 87642624 83 122 85 290 View
57 4000765 28029408 177 35 75 287 View
58 4000781 234887289 58 103 122 283 View
59 4000784 32264483 270 13 283 View
60 4000807 198606222 77 61 138 276 View
61 4000808 101151001 75 101 99 275 View
62 4000837 109554918 265 3 268 View
63 4000842 155678067 29 221 17 267 View
64 4000869 19430613 190 37 34 261 View
65 4000872 43844333 44 92 124 260 View
66 4000877 155959732 246 8 3 257 View
67 4000879 51517475 194 54 8 256 View
68 4000898 206675629 222 31 253 View
69 4000905 13723578 234 11 5 250 View
70 4000941 8797486 61 88 94 243 View
71 4000942 179970242 41 140 61 242 View
72 4000946 1855772 9 215 17 241 View
73 4000967 40380189 4 47 186 237 View
74 4000971 168032371 207 11 19 237 View
75 4000975 228783489 127 62 47 236 View
76 4000985 9556103 181 50 1 232 View
77 4000986 66351755 94 40 98 232 View
78 4000994 149885343 144 80 6 230 View
79 4001005 31921127 11 130 89 230 View
80 4001010 1848062 115 81 33 229 View
81 4001026 229046516 145 43 40 228 View
82 4001053 116553486 92 51 81 224 View
83 4001079 161032925 83 64 71 218 View
84 4001082 63124476 197 9 12 218 View
85 4001087 155522201 26 155 36 217 View
86 4001099 44748022 32 171 12 215 View
87 4001113 46699862 17 50 145 212 View
88 4001122 5897169 89 54 67 210 View
89 4001126 28330145 201 8 209 View
90 4001127 1215397 84 114 11 209 View
91 4001128 53929333 65 88 55 208 View
92 4001137 174875834 185 15 6 206 View
93 4001146 66344213 5 165 35 205 View
94 4001147 114490351 41 85 79 205 View
95 4001173 244445818 110 26 65 201 View
96 4001198 174276380 84 94 18 196 View
97 4001235 169675865 61 55 74 190 View
98 4001255 23576394 37 149 1 187 View
99 4001261 42944524 37 63 84 184 View
100 4001296 155914209 75 20 86 181 View
101 4001309 9556207 128 52 180 View
102 4001313 221263162 148 31 179 View
103 4001315 154218515 179 179 View
104 4001339 1828253 170 6 176 View
105 4001344 111455365 164 5 6 175 View
106 4500002 120921873 56 115 3 174 View
107 4001373 155801048 77 72 23 172 View
108 4001389 1743292 169 1 170 View
109 4001390 150127572 157 11 2 170 View
110 4001394 201830567 170 170 View
111 4001411 155809244 89 26 53 168 View
112 4001478 66999203 24 78 57 159 View
113 4001486 109294819 127 25 6 158 View
114 4001490 92324136 139 11 8 158 View
115 4001498 42956898 153 3 1 157 View
116 4001504 8782419 103 21 32 156 View
117 4001521 32263722 132 16 6 154 View
118 4001523 42264644 84 27 43 154 View
119 4001526 32310936 148 6 154 View
120 4500159 155900488 72 65 14 151 View
121 4001564 145932224 150 150 View
122 4001567 172581818 18 20 112 150 View
123 4001580 157198481 89 56 4 149 View
124 4001585 185804418 24 35 90 149 View
125 4001613 111128898 146 146 View
126 4001615 43660161 94 2 50 146 View
127 4001619 40197714 10 133 3 146 View
128 4001622 15903533 134 8 2 144 View
129 4001657 111234336 59 36 48 143 View
130 4001669 32031811 96 33 13 142 View
131 4001694 22075499 128 12 140 View
132 4001705 1842422 127 9 2 138 View
133 4001707 9705669 28 35 75 138 View
134 4100214 108954308 137 1 138 View
135 4001744 171549716 126 7 2 135 View
136 4001751 35412047 124 10 134 View
137 4001766 32845682 132 1 133 View
138 4001772 229324233 74 58 1 133 View
139 4001801 149845124 122 6 3 131 View
140 4001815 23581633 84 25 20 129 View
141 4001817 30999116 49 48 32 129 View
142 4001848 31926399 4 109 14 127 View
143 4001855 841833 113 6 7 126 View
144 4001858 160577801 124 2 126 View
145 4001897 32022452 82 9 33 124 View
146 4001900 111635628 88 36 124 View
147 4001935 838672 58 37 27 122 View
148 4001936 28059210 95 19 8 122 View
149 4001937 150423135 14 99 9 122 View
150 4001931 9676584 38 65 16 119 View
151 4001976 42264564 84 16 19 119 View
152 4001985 31932001 16 72 31 119 View
153 4002028 226172907 110 5 1 116 View
154 4002050 154979804 107 4 4 115 View
155 4002056 156006642 111 4 115 View
156 4002084 162587298 39 61 13 113 View
157 4002093 21721895 76 7 29 112 View
158 4002100 121743529 52 53 7 112 View
159 4002101 147586189 68 19 25 112 View
160 4002105 167542951 37 73 2 112 View
161 4002138 13765300 7 87 16 110 View
162 4002151 160614566 31 19 59 109 View
163 4002169 9560432 104 4 108 View
164 4002170 150225656 104 2 2 108 View
165 4002182 198620479 72 31 4 107 View
166 4002212 222702451 65 37 3 105 View
167 4002216 156477667 90 6 9 105 View
168 4002225 206648001 102 2 104 View
169 4002268 12347233 94 8 102 View
170 4002280 151537537 82 18 1 101 View
171 4002287 963519 93 8 101 View
172 4002289 43384771 94 6 1 101 View
173 4002305 12469977 24 59 17 100 View
174 4002316 212762947 98 2 100 View
175 4100154 46312921 84 14 2 100 View
176 4002333 94919822 34 25 40 99 View
177 4002349 46313014 83 13 2 98 View
178 4002384 27680797 91 5 96 View
179 4002391 32262927 4 58 34 96 View
180 4002411 169684015 82 7 6 95 View
181 4002491 117439384 90 1 1 92 View
182 4002519 89261715 67 19 5 91 View
183 4002524 25628965 81 8 1 90 View
184 4002531 37974899 59 23 8 90 View
185 4002540 160797996 11 30 49 90 View
186 4002565 222685123 7 78 4 89 View
187 4002592 160708372 16 17 55 88 View
188 4002614 1765147 60 12 15 87 View
189 4002620 31013049 52 30 4 86 View
190 4002691 162522746 82 1 83 View
191 4002696 25635862 83 83 View
192 4002697 32127628 74 6 3 83 View
193 4002705 150574711 61 22 83 View
194 4002728 26113940 81 1 82 View
195 4002731 8420127 63 8 11 82 View
196 4002744 1806980 63 1 17 81 View
197 4002751 151501918 42 38 1 81 View
198 4002752 155533512 71 10 81 View
199 4002753 198671203 12 19 50 81 View
200 4002761 203805815 76 4 1 81 View
201 4002775 100988340 8 19 53 80 View
202 4002790 155495696 80 80 View
203 4002799 25446308 24 19 36 79 View
204 4002800 111609056 71 2 6 79 View
205 4002847 121743567 18 52 7 77 View
206 4002855 203800191 3 54 20 77 View
207 4002861 35406152 22 34 21 77 View
208 4002863 26753902 60 3 14 77 View
209 4002864 150093721 58 3 16 77 View
210 4002884 15873374 76 76 View
211 4002891 46692947 30 16 30 76 View
212 4002946 31866978 54 12 8 74 View
213 4002952 32947945 33 34 7 74 View
214 4002978 155847855 60 13 73 View
215 4003022 28950898 43 24 5 72 View
216 4002996 159013226 63 8 71 View
217 4500015 39004534 59 12 71 View
218 4003065 32255682 26 35 9 70 View
219 4003073 1112271 68 2 70 View
220 4003087 25436197 62 7 1 70 View
221 4003105 154939250 1 56 12 69 View
222 4003106 226376520 27 33 9 69 View
223 4003124 53777952 67 2 69 View
224 4003141 15900959 15 9 44 68 View
225 4003148 111137731 68 68 View
226 4003173 3628366 65 2 67 View
227 4003182 12536353 59 4 4 67 View
228 4003223 30987170 51 7 8 66 View
229 4003224 108080603 22 20 24 66 View
230 4003225 224287433 63 3 66 View
231 4003247 28373925 47 18 65 View
232 4003248 160806834 55 10 65 View
233 4003299 226067526 62 2 64 View
234 4003350 31778810 1 62 63 View
235 4003362 38520106 52 9 2 63 View
236 4003369 1768851 18 42 3 63 View
237 4003387 12608804 21 40 1 62 View
238 4003388 32139580 54 8 62 View
239 4003411 30985234 47 13 2 62 View
240 4003414 198733493 58 3 1 62 View
241 4003436 156119610 8 46 7 61 View
242 4003447 58678506 32 29 61 View
243 4003448 155676377 60 1 61 View
244 4003449 155676383 60 1 61 View
245 4003477 182744017 5 50 5 60 View
246 4003478 203656793 40 19 1 60 View
247 4003488 117628255 38 14 8 60 View
248 4003501 10224266 59 1 60 View
249 4003502 26702685 5 53 2 60 View
250 4003503 39860407 32 25 3 60 View
251 4003533 9703531 59 59 View
252 4003540 245039401 39 11 9 59 View
253 4003551 70311895 57 2 59 View
254 4003583 173754016 24 11 23 58 View
255 4003585 9811759 6 52 58 View
256 4003586 45456762 12 28 18 58 View
257 4003587 155669584 32 19 7 58 View
258 4003628 2276631 52 4 1 57 View
259 4003629 67286770 53 3 1 57 View
260 4003652 35017596 55 2 57 View
261 4003651 8418143 47 8 1 56 View
262 4003671 22064252 56 56 View
263 4003672 25633973 1 54 1 56 View
264 4003689 26734849 21 2 33 56 View
265 4003690 219184664 40 16 56 View
266 4003706 1878064 30 11 15 56 View
267 4003707 22091116 20 20 16 56 View
268 4003708 154414915 24 32 56 View
269 4003732 224431578 54 1 55 View
270 4003745 40264648 19 22 14 55 View
271 4003746 217585610 23 28 4 55 View
272 4003762 42196576 47 8 55 View
273 4003790 155669568 30 17 7 54 View
274 4500014 32134188 46 8 54 View
275 4003855 20933590 47 5 1 53 View
276 4003856 59694252 14 38 1 53 View
277 4003857 150094878 26 12 15 53 View
278 4003858 184675957 38 14 1 53 View
279 4003859 200162318 45 4 4 53 View
280 4003938 114463971 28 22 2 52 View
281 4003939 198658465 48 3 1 52 View
282 4003948 154585428 46 6 52 View
283 4003949 100394762 41 8 3 52 View
284 4003968 26686106 31 13 7 51 View
285 4003969 150688569 41 10 51 View
286 4003984 12400764 49 2 51 View
287 4003986 26718343 11 34 6 51 View
288 4003987 44944416 35 7 9 51 View
289 4003999 89570980 48 3 51 View
290 4004000 206767918 50 1 51 View
291 4004021 197922323 44 5 1 50 View
292 4004036 8474535 11 33 6 50 View
293 4004037 45740608 31 17 2 50 View
294 4004038 150841079 14 18 18 50 View
295 4004050 235311240 49 1 50 View
296 4004080 41118796 10 29 10 49 View
297 4004095 43376897 30 9 10 49 View
298 4004096 119966579 37 10 2 49 View
299 4004115 26873295 9 30 10 49 View
300 4004116 150080294 41 7 1 49 View
301 4004136 63372052 46 2 48 View
302 4004148 111657456 3 45 48 View
303 4004178 8512812 33 11 4 48 View
304 4004179 22096496 41 3 4 48 View
305 4004180 39222038 44 4 48 View
306 4004181 154266358 47 1 48 View
307 4004215 15415613 41 6 47 View
308 4004250 22221695 45 2 47 View
309 4004251 25630292 31 8 8 47 View
310 4004252 40045287 15 31 1 47 View
311 4004253 48149389 43 4 47 View
312 4004291 161175373 46 46 View
313 4004295 24840670 45 1 46 View
314 4004296 31906174 36 10 46 View
315 4004322 151429403 34 11 1 46 View
316 4004355 193224956 44 1 45 View
317 4004367 172352974 40 2 3 45 View
318 4004380 235257872 41 4 45 View
319 4004385 52487497 41 3 1 45 View
320 4004386 52524229 43 2 45 View
321 4004387 53886711 41 4 45 View
322 4004429 8693438 17 18 9 44 View
323 4004430 35766890 42 2 44 View
324 4004431 155608463 29 9 6 44 View
325 4004432 173997440 28 16 44 View
326 4004457 10277866 16 28 44 View
327 4004486 110348758 12 3 28 43 View
328 4004487 113765218 42 1 43 View
329 4004488 198653983 26 10 7 43 View
330 4004504 6680297 39 4 43 View
331 4004511 160447704 36 7 43 View
332 4004546 93139633 30 12 42 View
333 4004558 39300229 26 16 42 View
334 4004569 174970338 24 8 10 42 View
335 4004574 8682708 1 33 8 42 View
336 4004625 19621851 32 6 3 41 View
337 4004632 151018120 41 41 View
338 4004636 1854209 34 7 41 View
339 4004637 11380679 9 25 7 41 View
340 4004638 156210752 38 3 41 View
341 4004651 11023351 25 16 41 View
342 4004652 25452311 25 6 10 41 View
343 4004653 151987529 35 5 1 41 View
344 4004692 28987905 36 4 40 View
345 4004693 243717169 4 5 31 40 View
346 4004710 89222489 9 29 2 40 View
347 4004711 154741072 38 2 40 View
348 4004712 211280310 22 5 13 40 View
349 4004777 150091650 38 1 39 View
350 4004791 26124131 34 5 39 View
351 4004792 155533305 38 1 39 View
352 4004793 230227754 39 39 View
353 4004814 39283863 27 10 2 39 View
354 4004820 20764611 29 8 2 39 View
355 4004850 26296795 30 7 1 38 View
356 4004851 36718579 7 25 6 38 View
357 4004858 1801807 36 2 38 View
358 4004859 233998800 3 19 16 38 View
359 4004879 10036537 37 1 38 View
360 4004880 28075022 17 17 4 38 View
361 4004881 97552806 37 1 38 View
362 4004942 89302332 33 3 1 37 View
363 4004962 32657488 33 4 37 View
364 4004963 116774485 37 37 View
365 4004964 171535892 36 1 37 View
366 4004965 205738769 26 11 37 View
367 4004997 246593535 36 1 37 View
368 4100041 8465670 34 1 2 37 View
369 4005025 27760391 17 19 36 View
370 4005035 30991842 4 13 19 36 View
371 4005054 35325195 30 3 3 36 View
372 4005055 35823435 22 13 1 36 View
373 4005056 35995837 29 6 1 36 View
374 4005057 84562220 25 11 36 View
375 4005089 23125069 33 3 36 View
376 4005090 50577340 31 4 1 36 View
377 4005118 41848128 14 11 10 35 View
378 4005126 1825479 20 15 35 View
379 4005127 51836000 33 1 1 35 View
380 4005128 54032195 19 16 35 View
381 4005129 205087376 25 9 1 35 View
382 4005130 233805952 22 13 35 View
383 4005152 19180612 31 4 35 View
384 4005153 19180621 31 4 35 View
385 4005154 27466205 35 35 View
386 4005155 38996909 21 2 12 35 View
387 4005156 89550859 28 5 2 35 View
388 4005157 160587568 15 14 6 35 View
389 4005192 37493134 30 5 35 View
390 4005193 40402693 33 2 35 View
391 4005194 194253177 20 11 4 35 View
392 4005195 211270099 26 9 35 View
393 4005256 7916322 14 6 14 34 View
394 4005257 20810851 29 5 34 View
395 4005297 45835716 34 34 View
396 4005323 10144279 22 12 34 View
397 4005342 162583665 32 1 33 View
398 4005375 1404656 33 33 View
399 4005376 95249604 23 10 33 View
400 4005413 61812973 18 8 7 33 View
401 4005472 784446 25 7 32 View
402 4005473 222649822 31 1 32 View
403 4005503 25460463 27 4 1 32 View
404 4500008 19627829 30 2 32 View
405 4005533 26732155 31 31 View
406 4005544 1775507 11 19 1 31 View
407 4005545 8675626 24 6 1 31 View
408 4005546 113124703 26 5 31 View
409 4005547 150920311 30 1 31 View
410 4005548 154743995 22 9 31 View
411 4005587 154724369 13 14 4 31 View
412 4005593 20886291 29 2 31 View
413 4005594 32659811 21 10 31 View
414 4005595 152459304 31 31 View
415 4005596 160643866 27 4 31 View
416 4005646 24212792 28 2 30 View
417 4005648 243190313 29 1 30 View
418 4005654 26122828 28 2 30 View
419 4005655 26731961 25 5 30 View
420 4005656 40639766 15 10 5 30 View
421 4005657 42240749 22 2 6 30 View
422 4005658 155556024 16 14 30 View
423 4005682 6598758 30 30 View
424 4005683 27655133 12 17 1 30 View
425 4005684 40396345 27 1 2 30 View
426 4005723 227271029 10 16 4 30 View
427 4100171 27478930 28 2 30 View
428 4005769 178539487 22 1 6 29 View
429 4005777 155355387 28 1 29 View
430 4005778 193062335 24 5 29 View
431 4005798 1061982 26 2 1 29 View
432 4005806 19623157 27 2 29 View
433 4005807 28618456 26 3 29 View
434 4005808 44980965 28 1 29 View
435 4005809 111459620 22 7 29 View
436 4005848 32295273 29 29 View
437 4005869 23564705 11 15 3 29 View
438 4005870 44914117 26 3 29 View
439 4005903 145991720 8 20 28 View
440 4005935 27460769 27 1 28 View
441 4005936 40698467 21 7 28 View
442 4005970 11993053 28 28 View
443 4005971 52151350 3 1 24 28 View
444 4005996 155450267 27 1 28 View
445 4005997 1317451 24 4 28 View
446 4005999 1774371 24 4 28 View
447 4006017 150101711 15 8 4 27 View
448 4006034 20740227 27 27 View
449 4006035 24513524 22 5 27 View
450 4006036 25489968 27 27 View
451 4006037 235200962 23 4 27 View
452 4006057 2521324 21 6 27 View
453 4006061 39340253 17 6 4 27 View
454 4006062 40698456 21 6 27 View
455 4006063 51917580 21 6 27 View
456 4006064 52430661 26 1 27 View
457 4006065 55141761 20 3 4 27 View
458 4006066 202754904 24 3 27 View
459 4006103 1571828 27 27 View
460 4006104 147259774 3 19 5 27 View
461 4006135 20956585 19 5 3 27 View
462 4006139 26705452 18 8 1 27 View
463 4006161 183483346 5 14 7 26 View
464 4006174 22079661 26 26 View
465 4006175 27999783 21 4 1 26 View
466 4006176 161364589 22 1 3 26 View
467 4006177 175357885 10 16 26 View
468 4006178 235292342 22 2 2 26 View
469 4006179 242075670 21 4 1 26 View
470 4006211 1785348 19 7 26 View
471 4006212 1883069 9 14 3 26 View
472 4006213 66940646 25 1 26 View
473 4006214 155456902 13 10 3 26 View
474 4006215 155846885 25 1 26 View
475 4006260 235829670 24 1 1 26 View
476 4006272 176128510 26 26 View
477 4006315 11993556 24 1 25 View
478 4006316 27759599 7 15 3 25 View
479 4006317 32830076 23 2 25 View
480 4006318 35080806 25 25 View
481 4006319 42685980 25 25 View
482 4006320 150113878 25 25 View
483 4006321 246573923 11 5 9 25 View
484 4006347 103546981 25 25 View
485 4006352 26121546 9 9 7 25 View
486 4006353 27257524 9 8 8 25 View
487 4006354 110348248 2 8 15 25 View
488 4006404 26461576 22 3 25 View
489 4006405 26700679 24 1 25 View
490 4006406 31929558 25 25 View
491 4006428 8388523 15 8 2 25 View
492 4100188 150223699 21 4 25 View
493 4300017 28764419 21 4 25 View
494 4500004 150113876 25 25 View
495 4006475 8394269 14 10 24 View
496 4006476 8411596 23 1 24 View
497 4006477 26451283 13 7 4 24 View
498 4006478 28750502 7 13 4 24 View
499 4006504 153903085 20 3 1 24 View
500 4006515 36007682 8 16 24 View
501 4006516 52475610 22 1 1 24 View
502 4006517 113972821 20 2 2 24 View
503 4006518 154600212 21 3 24 View
504 4006519 167351168 20 4 24 View
505 4006520 241278859 16 8 24 View
506 4006561 12099260 21 3 24 View
507 4006562 26707550 22 2 24 View
508 4006563 155852233 22 2 24 View
509 4006564 173938101 24 24 View
510 4006614 13704695 1 22 23 View
511 4006617 25441811 16 7 23 View
512 4006621 3847027 15 2 6 23 View
513 4006622 26747080 12 9 2 23 View
514 4006623 41086033 18 5 23 View
515 4006660 23160032 13 10 23 View
516 4006661 46124931 20 3 23 View
517 4006662 66273726 23 23 View
518 4006663 155813023 13 8 2 23 View
519 4006664 211775731 22 1 23 View
520 4006665 219206532 4 12 7 23 View
521 4006714 155914673 17 6 23 View
522 4006729 10257433 23 23 View
523 4006730 35537498 21 1 1 23 View
524 4006731 155463562 18 4 1 23 View
525 4006732 161180574 4 19 23 View
526 4006733 198665642 14 6 3 23 View
527 4006796 26296733 18 3 1 22 View
528 4006797 162862119 18 4 22 View
529 4006798 162862215 21 1 22 View
530 4006807 27458180 13 9 22 View
531 4006808 46656275 18 3 1 22 View
532 4006809 155353454 21 1 22 View
533 4006810 182207761 9 9 4 22 View
534 4006851 28239828 22 22 View
535 4006852 32658181 21 1 22 View
536 4006853 107933922 22 22 View
537 4006854 151682246 3 7 12 22 View
538 4006855 163271746 2 9 11 22 View
539 4006856 220172785 13 7 2 22 View
540 4006904 225534669 22 22 View
541 4006911 20779706 22 22 View
542 4100126 32791043 20 2 22 View
543 4006969 161110255 19 2 21 View
544 4006981 12259387 17 4 21 View
545 4007016 55107889 11 6 4 21 View
546 4007028 12283877 21 21 View
547 4007029 12372196 19 2 21 View
548 4007030 15913519 16 5 21 View
549 4007031 33027850 9 6 6 21 View
550 4007032 150227015 19 2 21 View
551 4007033 228256075 20 1 21 View
552 4007079 1393806 15 6 21 View
553 4007095 21771561 19 1 1 21 View
554 4007096 26461629 19 2 21 View
555 4007097 35498433 13 6 2 21 View
556 4007123 27645531 16 5 21 View
557 4007124 35521201 16 5 21 View
558 4007179 89592659 18 2 20 View
559 4007180 150371626 15 5 20 View
560 4007226 1820117 20 20 View
561 4007227 16341758 20 20 View
562 4007228 28064706 18 2 20 View
563 4007229 34646405 20 20 View
564 4007230 36280181 14 6 20 View
565 4007231 44939318 1 9 10 20 View
566 4007232 108753053 2 18 20 View
567 4007289 1883027 8 9 3 20 View
568 4007290 75741668 18 2 20 View
569 4007291 97880851 8 12 20 View
570 4007292 100107297 20 20 View
571 4007302 27459853 17 2 1 20 View
572 4007303 53226156 4 16 20 View
573 4007304 68175392 18 2 20 View
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Contents
Description
VIS-Cistrome factor overlapping Description

The overlaps between integration site and cistrome are retrieved by genome search engine GIGGLE (Ryan M Layer et al. 2018). We built three indexs including histone modification, transcription factor binding site and chromatin accessibility, then we searched the significance of shared genomic loci (overlaps) between query VIS and Cistrome (Rongbin Zheng et al. 2019) genome interval files. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount could indicate that the virus integration site is a potentially functional DNA element.


  • HIV Overall Heatmap

This heatmap is an overall statistics for HIV VIS-Cistrome factor overlapped records by chromosome. The darker the red, the greater the overlapped records number. The user can view specific number by moving mouse pointer.

  • Browse data by Chromosome or Factor

The user can browse HIV VIS-Cistrome factor overlapped records data by specific chromosome or statistics histogram for specific Cistrome factor when users click the chromosome or Cistrome factor the user are interested in.

  • VIS locations with VIS-cistrome overlap information and VIS details for each chromosome

This table showed the VIS locations with VIS-cistrome overlap information and VIS details for each chromosome, you can click green button with number which indicates the overlapped records of this VIS and 3 cistrome factor (histone modification, transcription factor binding site and chromatin accessibility) to inspect details of cistrome sample and factor information, you can click "Detail" button to inspect other information of this VIS.