HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."

Show overlaps from virus related biological source

Factor Rank on this VIS	Factor Name	Overlapped Records	Details
1	NR3C1	18	View
2	AR	12	View
3	KLF15	2	View
4	DPF2	2	View
5	HOXB13	2	View
6	NR2F2	2	View
7	RAD21	2	View
8	FOSL1	2	View
9	C11orf30	2	View
10	SMARCA4	2	View
11	MED1	1	View
12	SMARCB1	1	View
13	BRD4	1	View
14	EP300	1	View
15	ATF3	1	View
16	SMARCE1	1	View
17	FOSL2	1	View
18	PGR	1	View
19	JUND	1	View
20	JUN	1	View
21	ARID3A	1	View
22	SUMO2	1	View

> Click to view overlapped records detail between VIS [DVID: 4002391] and all transcription factor binding site

Contents
Description

Table Description

This table at top of page is factor ranked by overlap number. The overlap number refers to the overlapping count between VIS selected and one sepecific cistrome factor. The user can click biological source filter with blue button to keep the overlaps which are associated with virus-related diseases based on cistrome sample's biological source.

Overlap

An overlap means a match between VIS and 1 of 3 Cistrome data (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.