Overview of Virus Integration Site (VIS)-Cistrome Factor Feature

This feature provides information of the overlapped records between VIS and Cistrome factors as well as Cistrome factor-related samples, the associated factor and overlap amount could indicate that the virus integration site is a potentially functional DNA element.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."
The table below shows a summary about VIS we collected as well as VIS-Cistrome factor overlapped records in each virus.


Virus VIS with Overlap VIS-Cistrome Overlap Disease Information
Hepatitis B Virus (HBV) 35003 9799923 Hepatocellular carcinoma
Occult HBV infection
Human Papillomavirus Virus (HPV) 11167 2139310 Adenosquamous carcinoma
Anal intraepithelial neoplasia
Cervical carcinoma
Cervical intraepithelial neoplasia
Clear cell carcinoma
Head and neck squamous cell carcinoma
Hepatocellular carcinoma
Neuroendocrine carcinoma
Oropharyngeal squamous cell carcinoma
Squamous-cell carcinoma
Bladder cancer
Adenocarcinoma
Epstein-Barr Virus (EBV) 1310 298123 B-cell lymphoma
Burkitt lymphoma
Extranodal natural killer T-cell lymphoma
Gastric carcinoma
Hodgkin lymphoma
Nasopharyngeal carcinoma
NK/T cell lymphoma
Adenovirus Associated Virus Type 2 (AAV2) 32 29289 Hepatocellular carcinoma
Merkel Cell Polyomavirus (MCV) 65 227180 Merkel cell carcinoma
Human Immunodeficiency Virus (HIV) 16388 1192779 AIDS dementia
AIDS-associated lymphoma
Angioimmunoblastic lymphadenopathy
HIV infection/AIDS
Human T-cell Lymphotropic Virus type-1 (HTLV1) 31253 3906810 Adult T cell leukemia/lymphoma
HTLV-1 associated myelopathy/tropical spastic paraparesis
Xenotropic Murine Leukemia Virus-Related Virus (XMRV) 62 185022 Prostate cancer
Neuroblastoma
Oral squamous cell carcinoma
Small cell lung cancer