HIV VIS Detail Information

> This page shows VIS [4002611] detail information, including site information (chromosome, GRCh38 location, disease, sample, etc) and literature information.


Site Information
DVID 4002611
VISID TVIS30008644
Chromosome chr4
GRCh38 Location 118866302
Disease HIV infection/AIDS  
Sample Cell line
Virus Reference Genome Not given
Target Gene SYNPO2     
Literature Information
PubMed PMID 23953889
Published year 2013
Journal Retrovirology
Title HIV latency and integration site placement in five cell-based models.
Author Sherrill-Mix S,Lewinski MK,Famiglietti M,Bosque A,Malani N,Ocwieja KE,Berry CC,Looney D,Shan L,Agosto LM,Pace MJ,Siliciano RF,O'Doherty U,Guatelli J,Planelles V,Bushman FD
Evidence BACKGROUND: HIV infection can be treated effectively with antiretroviral agents, but the persistence of a latent reservoir of integrated proviruses prevents eradication of HIV from infected individuals. The chromosomal environment of integrated proviruses has been proposed to influence HIV latency, but the determinants of transcriptional repression have not been fully clarified, and it is unclear whether the same molecular mechanisms drive latency in different cell culture models. Cells were infected in vitro and separated into fractions containing proviruses that were either expressed or silent/inducible, and integration site populations sequenced from each.

Contents
Description
  • Site Information
Detail information of site [4002611]
  • Literature Information
The details of literature that this site is associated with.