HIV Target gene Detail Information

> SYNPO2 Gene Search Result

Gene Information

Gene Name	SYNPO2
Gene ID	171024
Gene Full Name	synaptopodin 2
Transcripts	ENSG00000172403
Virus	HIV
Gene Type	protein coding
HPA Location Info	Actin filaments;Vesicles;
HPA Protein Class Info	Predicted intracellular proteins
Gene Function	Suppressor gene
Uniport_ID	Q9UMS6
HGNC ID	HGNC:17732
VEGA ID	OTTHUMG00000161165
String ID	9606.ENSP00000306015
PharmGKB ID	PA38244

Target gene [SYNPO2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4002611	chr4	86	1		87	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).