HBV VIS Detail Information

> This page shows VIS [1013545] detail information, including site information (chromosome, GRCh38 location, disease, sample, etc) and literature information.


Site Information
DVID 1013545
VISID TVIS10016062
Chromosome chr2
GRCh38 Location 29569506
Disease Hepatocellular carcinoma  
Sample Nontumor
Virus Reference Genome Not given
Target Gene ALK     
Literature Information
PubMed PMID 22962577
Published year 2012
Journal PloS one
Title Re-evaluation of the carcinogenic significance of hepatitis B virus integration in hepatocarcinogenesis.
Author Jiang S,Yang Z,Li W,Li X,Wang Y,Zhang J,Xu C,Chen PJ,Hou J,McCrae MA,Chen X,Zhuang H,Lu F
Evidence To examine the role of hepatitis B virus (HBV) integration in hepatocarcinogenesis, a systematic comparative study of both tumor and their corresponding non-tumor derived tissue has been conducted in a cohort of 60 HBV associated hepatocellular carcinoma (HCC) patients. No direct correlation between chromosome aberrations and the number of HBV integration events was found using a sensitive array-based comparative genomic hybridization (aCGH) assay. Strikingly, approximately 24% of the integrations examined had a breakpoint in a short 15 nt viral genome region (1820-1834 nt). Furthermore, the integrated viral sequences in both groups had a similar low frequency of C1653T, T1753V and A1762T/G1764A mutations. The frequency and patterns of HBV insertions were similar between tumor and their adjacent non-tumor samples indicating that the majority of HBV DNA integration events are not associated with hepatocarcinogenesis.

Contents
Description
  • Site Information
Detail information of site [1013545]
  • Literature Information
The details of literature that this site is associated with.