HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."

Show overlaps from virus related biological source

Factor Rank on this VIS	Factor Name	Overlapped Records	Details
1	STAG1	9	View
2	PAX5	3	View
3	SPI1	3	View
4	JUNB	2	View
5	T	2	View
6	ZMYM3	2	View
7	CDK8	2	View
8	ERG	2	View
9	MYB	2	View
10	PML	1	View
11	NBN	1	View
12	RELA	1	View
13	CBX5	1	View
14	BATF	1	View
15	TARDBP	1	View
16	NFIC	1	View
17	ZNF770	1	View
18	ELF1	1	View
19	BCLAF1	1	View
20	RUNX3	1	View
21	FLI1	1	View
22	CREB1	1	View
23	MTA3	1	View
24	CDK9	1	View
25	POU2F2	1	View
26	ETV6	1	View
27	TRIM28	1	View
28	ZNF441	1	View
29	RUNX1	1	View
30	BRD4	1	View
31	TCF7L1	1	View
32	EED	1	View
33	PBX2	1	View

> Click to view overlapped records detail between VIS [DVID: 4000556] and all transcription factor binding site

Contents
Description

Table Description

This table at top of page is factor ranked by overlap number. The overlap number refers to the overlapping count between VIS selected and one sepecific cistrome factor. The user can click biological source filter with blue button to keep the overlaps which are associated with virus-related diseases based on cistrome sample's biological source.

Overlap

An overlap means a match between VIS and 1 of 3 Cistrome data (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.