HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."

Show overlaps from virus related biological source

Factor Rank on this VIS	Factor Name	Overlapped Records	Details
1	STAG1	9	View
2	PAX5	3	View
3	SPI1	3	View
4	T	2	View
5	ZMYM3	2	View
6	CDK8	2	View
7	ERG	2	View
8	MYB	2	View
9	JUNB	2	View
10	ZNF770	1	View
11	ELF1	1	View
12	BCLAF1	1	View
13	RUNX3	1	View
14	FLI1	1	View
15	CREB1	1	View
16	MTA3	1	View
17	CDK9	1	View
18	POU2F2	1	View
19	ETV6	1	View
20	TRIM28	1	View
21	ZNF441	1	View
22	RUNX1	1	View
23	BRD4	1	View
24	TCF7L1	1	View
25	EED	1	View
26	PBX2	1	View
27	PML	1	View
28	NBN	1	View
29	RELA	1	View
30	CBX5	1	View
31	BATF	1	View
32	TARDBP	1	View
33	NFIC	1	View

> Click to view overlapped records detail between VIS [DVID: 4000556] and all transcription factor binding site

Contents
Description

Table Description

This table at top of page is factor ranked by overlap number. The overlap number refers to the overlapping count between VIS selected and one sepecific cistrome factor. The user can click biological source filter with blue button to keep the overlaps which are associated with virus-related diseases based on cistrome sample's biological source.

Overlap

An overlap means a match between VIS and 1 of 3 Cistrome data (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.