HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Show overlaps from virus related biological source
VIS [DVID: 4000196] Location [chr1: 117535027] (GRCh38)
Factor Rank on this VIS Factor Name Overlapped Records Details
1 CTCF 249 View
2 STAG1 38 View
3 RAD21 13 View
4 SMC1A 8 View
5 MAFK 7 View
6 JUND 7 View
7 RELA 5 View
8 SMC3 5 View
9 EBF1 4 View
10 TEAD1 3 View
11 SRF 3 View
12 GATA3 3 View
13 BRD4 2 View
14 ZNF654 2 View
15 NFKB2 2 View
16 EBNA3C 2 View
17 GATA2 2 View
18 TEAD2 2 View
19 FLI1 2 View
20 MAFG 2 View
21 TRIM22 2 View
22 EP300 2 View
23 ZSCAN29 2 View
24 MAFF 2 View
25 FOSL1 2 View
26 JUN 2 View
27 HDAC1 2 View
28 CBX3 2 View
29 JUNB 2 View
30 TEAD4 2 View
31 C11orf30 2 View
32 BACH2 2 View
33 NFATC1 1 View
34 GLIS1 1 View
35 NFIC 1 View
36 CEBPA 1 View
37 BATF3 1 View
38 ATF2 1 View
39 FOXK2 1 View
40 EBF3 1 View
41 PAX5 1 View
42 CDK12 1 View
43 MLLT1 1 View
44 MEF2A 1 View
45 VDR 1 View
46 SMARCA4 1 View
47 SMARCB1 1 View
48 IRF4 1 View
49 DNMT3A 1 View
50 CUX1 1 View
51 BCL3 1 View
52 RBPJ 1 View
53 DPF2 1 View
54 RUNX3 1 View
55 CHAMP1 1 View
56 STAT1 1 View
57 FOXM1 1 View
58 NBN 1 View
59 FOS 1 View
60 CREB1 1 View
61 TAL1 1 View
62 CBFB 1 View
63 TBL1XR1 1 View
64 STAT5A 1 View
65 ZNF382 1 View
66 TERC 1 View
67 BCL11A 1 View
68 IKZF1 1 View
69 SUMO1 1 View
70 POU2F2 1 View
71 PBX2 1 View
72 SMARCA5 1 View
73 ARID3A 1 View
74 MTA2 1 View
75 IRF1 1 View
76 NFKB1 1 View
77 BATF 1 View
78 ZNF692 1 View
79 BCLAF1 1 View


> Click to view overlapped records detail between VIS [DVID: 4000196] and all transcription factor binding site


Contents
Description
  • Table Description
This table at top of page is factor ranked by overlap number. The overlap number refers to the overlapping count between VIS selected and one sepecific cistrome factor. The user can click biological source filter with blue button to keep the overlaps which are associated with virus-related diseases based on cistrome sample's biological source.
  • Overlap
An overlap means a match between VIS and 1 of 3 Cistrome data (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.