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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 101151001-101151002 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM614634 HepG2 Epithelium Liver CEBPA [Search on ENCODE]
GSM614633 HepG2 Epithelium Liver CEBPA [Search on ENCODE]
GSM730702 None Endothelial Cell Umbilical Vein GATA2 [Search on ENCODE]
GSM730701 None Endothelial Cell Umbilical Vein GATA2 [Search on ENCODE]
GSM970258 None Proerythroblast Bone Marrow GATA1 [Search on ENCODE]
GSM1278240 None Proerythroblast Bone Marrow GATA1 [Search on ENCODE]
GSM935630 A549 Epithelium Lung CEBPB [Search on ENCODE]
GSM935295 H1 Embryonic Stem Cell Embryo CEBPB [Search on ENCODE]
GSM935625 HeLa-S3 Epithelium Cervix TCF7L2 [Search on ENCODE]
GSM935553 HeLa-S3 Epithelium Cervix CEBPB [Search on ENCODE]
GSM935622 HepG2 Epithelium Liver CEBPB [Search on ENCODE]
GSM935306 HepG2 Epithelium Liver MAFF [Search on ENCODE]
GSM935275 HepG2 Epithelium Liver ARID3A [Search on ENCODE]
GSM935493 HepG2 Epithelium Liver CEBPB [Search on ENCODE]
GSM935347 None Endothelial Cell Umbilical Vein GATA2 [Search on ENCODE]
GSM935519 IMR90 Fibroblast Lung CEBPB [Search on ENCODE]
GSM935403 IMR90 Fibroblast Lung MAFK [Search on ENCODE]
GSM935499 K562 Erythroblast Bone Marrow CEBPB [Search on ENCODE]
GSM935457 MCF-10A Epithelium Breast STAT3 [Search on ENCODE]
GSM935398 MCF-10A Epithelium Breast FOS [Search on ENCODE]
GSM935396 MCF-10A Epithelium Breast FOS [Search on ENCODE]
GSM935397 MCF-10A Epithelium Breast FOS [Search on ENCODE]
GSM935438 MCF-10A Epithelium Breast FOS [Search on ENCODE]
GSM1010802 ECC-1 Epithelium Endometrium CEBPB [Search on ENCODE]
GSM1010852 HCT-116 None Colon CEBPB [Search on ENCODE]
GSM1010757 HCT-116 None Colon ATF3 [Search on ENCODE]
GSM803507 HepG2 Epithelium Liver SP1 [Search on ENCODE]
GSM1010809 HepG2 Epithelium Liver ZEB1 [Search on ENCODE]
GSM1010878 K562 Erythroblast Bone Marrow CEBPB [Search on ENCODE]
GSM1010738 SK-N-SH Neuroblastoma cell Brain GATA3 [Search on ENCODE]
GSM1250892 YCC3 Epithelium None GATA4 [Search on ENCODE]
GSM1250893 YCC3 Epithelium None GATA6 [Search on ENCODE]
GSM1250896 AGS Epithelium Stomach GATA4 [Search on ENCODE]
GSM1250897 AGS Epithelium Stomach GATA6 [Search on ENCODE]
GSM1503220 None None Coronary artery smooth muscle JUND [Search on ENCODE]
GSM1480744 TSU-1621-MT None None RUNX1 [Search on ENCODE]
GSM1678029 PC-3 Epithelium Prostate DAXX [Search on ENCODE]
GSM1684635 None Mesenchymal Stem Cell None CEBPB [Search on ENCODE]
GSM791411 LS180 Epithelium Colon CEBPB [Search on ENCODE]
GSM791412 LS180 Epithelium Colon CEBPB [Search on ENCODE]
GSM1515738 SF268 None None YAP1 [Search on ENCODE]
GSM1515741 SF268 None None TEAD1 [Search on ENCODE]
GSM1515742 SF268 None None TEAD1 [Search on ENCODE]
GSM1542532 NCI-H2052 Epithelium Lung YAP1 [Search on ENCODE]
GSM1542533 NCI-H2052 Epithelium Lung YAP1 [Search on ENCODE]
GSM1614036 MDA-MB-231 Epithelium Breast JUN [Search on ENCODE]
GSM1664955 MSTO None None TEAD1 [Search on ENCODE]
GSM1667161 HuCCT1 None None TEAD1 [Search on ENCODE]
GSM1670709 HuCCT1 None None SMC1A [Search on ENCODE]
GSM1716766 LHSAR Epithelium Prostate HOXB13 [Search on ENCODE]
GSM1716769 LHSAR Epithelium Prostate AR [Search on ENCODE]
GSM1716770 LHSAR Epithelium Prostate AR [Search on ENCODE]
ENCSR331ORD_1 HepG2 Epithelium Liver CREB1 [Search on ENCODE]
ENCSR416QLJ_1 K562 Erythroblast Bone Marrow CEBPB [Search on ENCODE]
ENCSR416QLJ_2 K562 Erythroblast Bone Marrow CEBPB [Search on ENCODE]
ENCSR528PSI_1 HepG2 Epithelium Liver HLF [Search on ENCODE]
ENCSR528PSI_2 HepG2 Epithelium Liver HLF [Search on ENCODE]
ENCSR620VIC_2 K562 Erythroblast Bone Marrow CEBPG [Search on ENCODE]
ENCSR917QNE_1 None None Liver RAD21 [Search on ENCODE]
GSM1855965 MDA-MB-231 Epithelium Mammary Gland GATA3 [Search on ENCODE]
GSM1856031 MDA-MB-231 Epithelium Mammary Gland GATA3 [Search on ENCODE]
GSM1856030 MDA-MB-231 Epithelium Mammary Gland GATA3 [Search on ENCODE]
GSM1856013 MDA-MB-231 Epithelium Mammary Gland GATA3 [Search on ENCODE]
GSM1856012 MDA-MB-231 Epithelium Mammary Gland GATA3 [Search on ENCODE]
GSM1855971 MDA-MB-231 Epithelium Mammary Gland GATA3 [Search on ENCODE]
GSM1855970 MDA-MB-231 Epithelium Mammary Gland GATA3 [Search on ENCODE]
GSM1855969 MDA-MB-231 Epithelium Mammary Gland GATA3 [Search on ENCODE]
GSM1855968 MDA-MB-231 Epithelium Mammary Gland GATA3 [Search on ENCODE]
GSM1574274 CFPAC-1 None Pancreatic ductal FOXA1 [Search on ENCODE]
GSM1488758 None Erythroid progenitor Bone Marrow GATA2 [Search on ENCODE]
GSM2029580 ZR-75-30 None None EP300 [Search on ENCODE]
GSM2042905 HT29 colorectal adenocarcinoma None POLR2A [Search on ENCODE]
GSM2042845 HT29 colorectal adenocarcinoma None NR1H2 [Search on ENCODE]
GSM2330590 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330589 SUM159PT Mammary carcinoma cell Breast BRD4 [Search on ENCODE]
GSM2330568 SUM159PT None Breast CEBPB [Search on ENCODE]
GSM2330567 SUM159PT None Breast CEBPB [Search on ENCODE]
GSM2330566 SUM159PT None Breast CEBPB [Search on ENCODE]
GSM2330565 SUM159PT None Breast CEBPB [Search on ENCODE]
GSM2501568 MDA-MB-231 None Breast TP53 [Search on ENCODE]
GSM2550216 None Fibroblast None EP300 [Search on ENCODE]
GSM2550237 None Progenitor Cells None EP300 [Search on ENCODE]
GSM2359455 PC-9 Lung Cancer Cell Lung BRD4 [Search on ENCODE]
GSM2359451 PC-9 Lung Cancer Cell Lung BRD4 [Search on ENCODE]
GSM2359453 PC-9 Lung Cancer Cell Lung BRD4 [Search on ENCODE]
GSM2817659 H9 Embryonic Stem Cell Embryo GATA3 [Search on ENCODE]
GSM2877105 K562 Erythroblast Bone Marrow GATA1 [Search on ENCODE]
GSM2436677 A673 Polygonal Muscle FLI1 [Search on ENCODE]
GSM2436676 A673 Polygonal Muscle FLI1 [Search on ENCODE]
GSM2550244 None Endothelial Cell None EP300 [Search on ENCODE]
GSM2394399 JHU-06 Endothelial Cell None CEBPD [Search on ENCODE]
GSM2409689 HS-ES-2M Embryonic Stem Cell epithelioid sarcoma SMARCC1 [Search on ENCODE]
GSM2401453 BJ Fibroblast Skin GATA4 [Search on ENCODE]
GSM2050700 None Endoderm Cell Endoderm GATA6 [Search on ENCODE]
GSM2430674 BJ Fibroblast Skin FOXA2 [Search on ENCODE]
GSM2430676 BJ Fibroblast Skin GATA4 [Search on ENCODE]
GSM2550195 None Progenitor Cells None EP300 [Search on ENCODE]
GSM2360622 MDA-231 Epithelium Mammary Gland ZEB1 [Search on ENCODE]
GSM2550258 None Fibroblast None EP300 [Search on ENCODE]
GSM2977010 None Keratinocyte None PRMT1 [Search on ENCODE]
GSM2394421 JHU-06 Endothelial Cell None RELA [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.