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HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 10280459-10281096 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM530666 IMR90 Fibroblast Lung DNase [Search on ENCODE]
GSM530665 IMR90 Fibroblast Lung DNase [Search on ENCODE]
GSM468801 IMR90 Fibroblast Lung DNase [Search on ENCODE]
GSM468792 IMR90 Fibroblast Lung DNase [Search on ENCODE]
GSM701532 None Cortex Fetal Kidney DNase [Search on ENCODE]
GSM701520 None None Fetal Renal Pelvis Left DNase [Search on ENCODE]
GSM701515 None Epithelium Kidney DNase [Search on ENCODE]
GSM701511 None Cortex Fetal Kidney DNase [Search on ENCODE]
GSM665834 None Epithelium Kidney DNase [Search on ENCODE]
GSM665833 None Epithelium Fetal Kidney Right DNase [Search on ENCODE]
GSM665829 None Epithelium Kidney DNase [Search on ENCODE]
GSM665821 None Epithelium Fetal Kidney Right DNase [Search on ENCODE]
GSM665816 None Epithelium Kidney DNase [Search on ENCODE]
GSM665810 None Epithelium Fetal Kidney Right DNase [Search on ENCODE]
GSM530655 None Cortex Fetal Kidney DNase [Search on ENCODE]
GSM1024607 None Epithelium Fetal Kidney Right DNase [Search on ENCODE]
GSM817211 None Cortex Fetal Kidney Left DNase [Search on ENCODE]
GSM817218 None Epithelium Fetal Renal Pelvis DNase [Search on ENCODE]
GSM817209 None Epithelium Fetal Renal Pelvis Left DNase [Search on ENCODE]
GSM817202 None Cortex Fetal Kidney Right DNase [Search on ENCODE]
GSM817210 None Cortex Fetal Kidney Right DNase [Search on ENCODE]
GSM905352 U87MG Glial Cell Brain DNase [Search on ENCODE]
GSM905354 U87MG Glial Cell Brain DNase [Search on ENCODE]
GSM646564 None Fibroblast Skin DNase [Search on ENCODE]
GSM646565 None Epithelium None DNase [Search on ENCODE]
GSM646560 None Epithelium Amnion DNase [Search on ENCODE]
GSM646561 None Epithelium Mammary Gland DNase [Search on ENCODE]
GSM909312 None Fibroblast Foreskin DNase [Search on ENCODE]
GSM931361 WI-38 Fibroblast Lung DNase [Search on ENCODE]
GSM931362 WI-38 Fibroblast Lung DNase [Search on ENCODE]
GSM1102740 None Epithelium Fetal Kidney DNase [Search on ENCODE]
GSM878645 None None Fetal Skin Biceps Left DNase [Search on ENCODE]
GSM878644 None None Fetal Skin Biceps Left DNase [Search on ENCODE]
GSM878636 None None Fetal Skin Abdomen DNase [Search on ENCODE]
GSM878623 None Fibroblast Fetal Skin Back DNase [Search on ENCODE]
GSM878624 None Fibroblast Fetal Skin Back DNase [Search on ENCODE]
GSM878648 None None Fetal Skin Quadriceps Left DNase [Search on ENCODE]
GSM878639 None None Fetal Muscle Back DNase [Search on ENCODE]
GSM878642 None None Fetal Skin Biceps Right DNase [Search on ENCODE]
GSM878647 None None Fetal Skin Quadriceps Right DNase [Search on ENCODE]
GSM878633 None Fibroblast Fetal Skin Scalp DNase [Search on ENCODE]
GSM878649 None None Fetal Skin Quadriceps Left DNase [Search on ENCODE]
GSM878662 None Epithelium Fetal Renal Pelvis DNase [Search on ENCODE]
GSM878640 None None Fetal Skin Upper Back DNase [Search on ENCODE]
GSM878646 None None Fetal Skin Quadriceps Right DNase [Search on ENCODE]
GSM878629 None Cortex Fetal Kidney DNase [Search on ENCODE]
GSM878641 None None Fetal Skin Upper Back DNase [Search on ENCODE]
GSM878667 None Cortex Fetal Kidney DNase [Search on ENCODE]
GSM878635 None None Fetal Skin Abdomen DNase [Search on ENCODE]
GSM878643 None None Fetal Skin Biceps Right DNase [Search on ENCODE]
GSM878634 None Fibroblast Fetal Skin Scalp DNase [Search on ENCODE]
GSM878666 None Epithelium Fetal Kidney DNase [Search on ENCODE]
GSM1027342 None Epithelium Fetal Kidney DNase [Search on ENCODE]
GSM1027346 None Epithelium Fetal Kidney Right DNase [Search on ENCODE]
GSM1027315 None Epithelium Fetal Renal Pelvis DNase [Search on ENCODE]
GSM1027323 None Cortex Fetal Kidney DNase [Search on ENCODE]
GSM1027347 None Epithelium Fetal Kidney Left DNase [Search on ENCODE]
GSM1027314 None Cortex Fetal Kidney DNase [Search on ENCODE]
GSM1027329 None Epithelium Fetal Kidney DNase [Search on ENCODE]
GSM1027324 None Epithelium Fetal Renal Pelvis DNase [Search on ENCODE]
GSM1027336 None Epithelium Fetal Kidney Left DNase [Search on ENCODE]
GSM1027337 None Epithelium Fetal Kidney Right DNase [Search on ENCODE]
GSM817192 None Epithelium Fetal Renal Pelvis Right DNase [Search on ENCODE]
GSM817169 None Fibroblast Foreskin DNase [Search on ENCODE]
GSM817170 None Fibroblast Foreskin DNase [Search on ENCODE]
GSM817176 None Cortex Fetal Kidney DNase [Search on ENCODE]
GSM817158 None None Fetal Skin DNase [Search on ENCODE]
GSM1014512 NHDF-neo Fibroblast Skin DNase [Search on ENCODE]
GSM1014518 None Embryonic Fibroblast Heart DNase [Search on ENCODE]
GSM1014508 HA-sp Astrocyte Spinal Cord DNase [Search on ENCODE]
GSM1014527 AG10803 Fibroblast Skin DNase [Search on ENCODE]
GSM1014524 LHCN-M2 Myoblast Skeletal Muscle DNase [Search on ENCODE]
GSM1014530 None Fibroblast Heart DNase [Search on ENCODE]
GSM1014531 None Embryonic Fibroblast Foreskin DNase [Search on ENCODE]
GSM1014520 None Epithelium None DNase [Search on ENCODE]
GSM1014522 None Th2 None DNase [Search on ENCODE]
GSM1014534 HGF Fibroblast Gingiva DNase [Search on ENCODE]
GSM1014538 M059J Glial Cell Brain DNase [Search on ENCODE]
GSM723024 IMR90 Fibroblast Lung DNase [Search on ENCODE]
GSM774241 None Fibroblast Foreskin DNase [Search on ENCODE]
GSM774221 None Epithelium Fetal Kidney DNase [Search on ENCODE]
GSM774222 None Epithelium Fetal Renal Pelvis DNase [Search on ENCODE]
GSM774240 None Fibroblast Foreskin DNase [Search on ENCODE]
GSM849030 None Fibroblast Periodontal Ligament DNase [Search on ENCODE]
GSM849029 None Fibroblast Umbilical Vein DNase [Search on ENCODE]
GSM849027 None Cortex Kidney DNase [Search on ENCODE]
GSM849026 None Astrocyte Brain DNase [Search on ENCODE]
GSM849028 None Fibroblast Lung DNase [Search on ENCODE]
GSM1220603 None Epithelium Fetal Kidney DNase [Search on ENCODE]
GSM1220605 None Fibroblast Fetal Skin Back DNase [Search on ENCODE]
GSM1220606 None Fibroblast Fetal Skin Scalp DNase [Search on ENCODE]
GSM1220607 None None Fetal Skin Abdomen DNase [Search on ENCODE]
GSM1220608 None None Fetal Skin Upper Back DNase [Search on ENCODE]
GSM1220609 None None Fetal Skin Biceps Right DNase [Search on ENCODE]
GSM1220610 None None Fetal Skin Quadriceps Right DNase [Search on ENCODE]
GSM1338307 None Fibroblast None DNase [Search on ENCODE]
GSM1338308 None Fibroblast None DNase [Search on ENCODE]
GSM1338309 None Fibroblast None DNase [Search on ENCODE]
GSM1338310 None Fibroblast None DNase [Search on ENCODE]
GSM736590 AG04449 Fibroblast Skin DNase [Search on ENCODE]
GSM736551 AG09309 Fibroblast Skin DNase [Search on ENCODE]
GSM736616 AG09309 Fibroblast Skin DNase [Search on ENCODE]
GSM736518 BJ Fibroblast Skin DNase [Search on ENCODE]
GSM736596 BJ Fibroblast Skin DNase [Search on ENCODE]
GSM736509 None Endothelial Cell Umbilical Vein DNase [Search on ENCODE]
GSM736494 None Embryonic Fibroblast Heart DNase [Search on ENCODE]
GSM736601 None Embryonic Fibroblast Heart DNase [Search on ENCODE]
GSM736547 None Fibroblast Eye DNase [Search on ENCODE]
GSM736515 None Fibroblast Eye DNase [Search on ENCODE]
GSM736569 None Epithelium None DNase [Search on ENCODE]
GSM736572 None Embryonic Fibroblast Foreskin DNase [Search on ENCODE]
GSM736602 None Embryonic Fibroblast Foreskin DNase [Search on ENCODE]
GSM736605 None Embryonic Fibroblast Foreskin DNase [Search on ENCODE]
GSM736524 None Embryonic Fibroblast Foreskin DNase [Search on ENCODE]
GSM736576 HGF Fibroblast Gingiva DNase [Search on ENCODE]
GSM736579 HGF Fibroblast Gingiva DNase [Search on ENCODE]
GSM736541 None Epithelium Mammary Gland DNase [Search on ENCODE]
GSM736628 None Epithelium Mammary Gland DNase [Search on ENCODE]
GSM736621 None Epithelium None DNase [Search on ENCODE]
GSM736528 None Fibroblast Periodontal Ligament DNase [Search on ENCODE]
GSM736632 None Fibroblast Periodontal Ligament DNase [Search on ENCODE]
GSM736549 None Cortex Kidney DNase [Search on ENCODE]
GSM736527 HRE Epithelium None DNase [Search on ENCODE]
GSM1024787 LHCN-M2 Myoblast Skeletal Muscle DNase [Search on ENCODE]
GSM1024786 LHCN-M2 Myoblast Skeletal Muscle DNase [Search on ENCODE]
GSM736584 None Astrocyte Brain DNase [Search on ENCODE]
GSM736544 None Astrocyte Brain DNase [Search on ENCODE]
GSM736520 NHDF-Ad Fibroblast Skin DNase [Search on ENCODE]
GSM736567 NHDF-Ad Fibroblast Skin DNase [Search on ENCODE]
GSM736498 NHDF-neo Fibroblast Skin DNase [Search on ENCODE]
GSM736546 NHDF-neo Fibroblast Skin DNase [Search on ENCODE]
GSM736612 NHLF Fibroblast Lung DNase [Search on ENCODE]
GSM736536 NHLF Fibroblast Lung DNase [Search on ENCODE]
GSM736497 SKMC Myoblast Skeletal Muscle DNase [Search on ENCODE]
GSM736593 SKMC Myoblast Skeletal Muscle DNase [Search on ENCODE]
GSM1024739 None Th2 Blood DNase [Search on ENCODE]
GSM736613 WI-38 Fibroblast Lung DNase [Search on ENCODE]
GSM763534 BJ Fibroblast Skin DNase [Search on ENCODE]
GSM1662258 None Fibroblast None ATAC-seq [Search on ENCODE]
GSM1662259 None Fibroblast None ATAC-seq [Search on ENCODE]
GSM1662261 None Fibroblast None ATAC-seq [Search on ENCODE]
ENCSR405TXU_1 None Adipocyte None DNase [Search on ENCODE]
ENCSR405TXU_2 None Adipocyte None DNase [Search on ENCODE]
ENCSR548MMD_1 BJ Fibroblast Skin DNase [Search on ENCODE]
ENCSR548MMD_2 BJ Fibroblast Skin DNase [Search on ENCODE]
ENCSR217TAW_1 None Fibroblast None DNase [Search on ENCODE]
ENCSR217TAW_2 None Fibroblast None DNase [Search on ENCODE]
ENCSR066WZJ_1 None None Kidney DNase [Search on ENCODE]
ENCSR207TUX_1 None Stem cell None DNase [Search on ENCODE]
ENCSR768OLL_1 None None Kidney DNase [Search on ENCODE]
GSM2174882 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2174881 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2174880 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2174879 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2174878 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2174877 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2174876 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2174875 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2098982 HFF Fibroblast Foreskin ATAC-seq [Search on ENCODE]
GSM2098981 HFF Fibroblast Foreskin ATAC-seq [Search on ENCODE]
GSM2098979 HFF Fibroblast Foreskin ATAC-seq [Search on ENCODE]
GSM1876024 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM1876026 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM1876023 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM1876022 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM1876028 None Smooth Muscle Cell Coronary artery smooth muscle ATAC-seq [Search on ENCODE]
GSM1915004 MG-63 Osteosarcoma cell None DNase [Search on ENCODE]
GSM2401442 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2401443 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2977486 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2977487 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2430668 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2430669 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2898847 None Cardiomyocyte None ATAC-seq [Search on ENCODE]
GSM2430671 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
GSM2430672 BJ Fibroblast Skin ATAC-seq [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.