Home
Virus
Gene
Disease
Dataset
Download
Help
 
HIV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 89693192-89693193 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM730702 None Endothelial Cell Umbilical Vein GATA2 [Search on ENCODE]
GSM1032075 SEM Pre-B Lymphocyte None RUNX1 [Search on ENCODE]
GSM585590 SKNO-1 Myeloblast Bone Marrow ERG [Search on ENCODE]
GSM863154 U937 None Pleura FLI1 [Search on ENCODE]
GSM1122317 ME-1 Leukemia Cell None EP300 [Search on ENCODE]
GSM1122314 ME-1 Leukemia Cell None ERG [Search on ENCODE]
GSM1122306 ME-1 Leukemia Cell None RUNX1 [Search on ENCODE]
GSM726978 SKNO-1 Myeloblast Bone Marrow RUNX1 [Search on ENCODE]
GSM1113433 Kasumi-1 Myeloblast Blood REPIN1 [Search on ENCODE]
GSM1233932 GM12890 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234098 GM19238 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234161 GM2255 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234178 GM2588 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1234197 GM2610 Lymphoblastoid Blood STAG1 [Search on ENCODE]
GSM1003570 K562 Erythroblast Bone Marrow KDM1A [Search on ENCODE]
GSM935431 GM12878 B Lymphocyte Blood MXI1 [Search on ENCODE]
GSM935442 GM12878 B Lymphocyte Blood IKZF1 [Search on ENCODE]
GSM935375 GM12878 B Lymphocyte Blood EBF1 [Search on ENCODE]
GSM935273 GM19099 Lymphoblastoid Blood RELA [Search on ENCODE]
GSM935439 K562 Erythroblast Bone Marrow RCOR1 [Search on ENCODE]
GSM1003626 SK-N-SH Neuroblastoma cell Brain EP300 [Search on ENCODE]
GSM1003628 SK-N-SH_RA Neuron Brain RAD21 [Search on ENCODE]
GSM1010881 GM12878 B Lymphocyte Blood NFIC [Search on ENCODE]
GSM1010731 GM12878 B Lymphocyte Blood FOXM1 [Search on ENCODE]
GSM1010771 GM12878 B Lymphocyte Blood PML [Search on ENCODE]
GSM1010729 GM12878 B Lymphocyte Blood MTA3 [Search on ENCODE]
GSM1010822 HL-60 Promyeloblast Blood GABPA [Search on ENCODE]
GSM1010782 K562 Erythroblast Bone Marrow NR2F2 [Search on ENCODE]
GSM1334005 GM12878 B Lymphocyte Blood SPI1 [Search on ENCODE]
GSM1334006 GM12878 B Lymphocyte Blood SPI1 [Search on ENCODE]
GSM1334007 GM12878 B Lymphocyte Blood SPI1 [Search on ENCODE]
GSM1370276 OCI-Ly3 B Lymphocyte Bone Marrow SPIB [Search on ENCODE]
GSM1485998 U937 None Pleura DEK [Search on ENCODE]
GSM1438987 None Pre-B Lymphocyte None TCF7L1 [Search on ENCODE]
GSM1438989 None Pre-B Lymphocyte None PBX1 [Search on ENCODE]
GSM1438990 None Pre-B Lymphocyte None EP300 [Search on ENCODE]
GSM1480735 TSU-1621-MT None None ERG [Search on ENCODE]
GSM1534443 Kasumi-1 Myeloblast Blood NCOR1 [Search on ENCODE]
GSM1579346 None Embryonic Stem Cell None CTNNB1 [Search on ENCODE]
GSM1647185 HEK293A None None MEF2B [Search on ENCODE]
GSM1817190 None Neural crest cell Cranial NR2F1 [Search on ENCODE]
GSM1817197 None Neural crest cell Cranial TFAP2A [Search on ENCODE]
GSM1817200 None Neural crest cell Cranial TFAP2A [Search on ENCODE]
GSM1893926 MOLM-14 Myeloid Cell None CDK8 [Search on ENCODE]
GSM1893928 MOLM-14 Myeloid Cell None CDK8 [Search on ENCODE]
GSM1893930 MOLM-14 Myeloid Cell None CDK8 [Search on ENCODE]
GSM1893932 MOLM-14 Myeloid Cell None CDK8 [Search on ENCODE]
GSM1893934 MOLM-14 Myeloid Cell None BRD4 [Search on ENCODE]
GSM1893936 MOLM-14 Myeloid Cell None BRD4 [Search on ENCODE]
GSM1893938 MOLM-14 Myeloid Cell None BRD4 [Search on ENCODE]
GSM837613 None Myoblast Muscle DUX4 [Search on ENCODE]
GSM1901544 HL-60 Promyeloblast Blood JMJD1C [Search on ENCODE]
ENCSR075HTM_2 K562 Erythroblast Bone Marrow HDAC2 [Search on ENCODE]
ENCSR091JXL_1 K562 Erythroblast Bone Marrow HES1 [Search on ENCODE]
ENCSR115SMW_1 K562 Erythroblast Bone Marrow PKNOX1 [Search on ENCODE]
ENCSR157TCS_1 K562 Erythroblast Bone Marrow SMARCE1 [Search on ENCODE]
ENCSR168SMX_1 None None Liver NR2F2 [Search on ENCODE]
ENCSR199WXF_1 GM12878 B Lymphocyte Blood EED [Search on ENCODE]
ENCSR293QAR_1 GM12878 B Lymphocyte Blood MTA2 [Search on ENCODE]
ENCSR360HRA_1 K562 Erythroblast Bone Marrow KDM1A [Search on ENCODE]
ENCSR360HRA_2 K562 Erythroblast Bone Marrow KDM1A [Search on ENCODE]
ENCSR372GIN_2 GM12878 B Lymphocyte Blood CBX5 [Search on ENCODE]
ENCSR387UWP_1 K562 Erythroblast Bone Marrow HDAC1 [Search on ENCODE]
ENCSR395HWC_1 K562 Erythroblast Bone Marrow IKZF1 [Search on ENCODE]
ENCSR416QLJ_1 K562 Erythroblast Bone Marrow CEBPB [Search on ENCODE]
ENCSR416QLJ_2 K562 Erythroblast Bone Marrow CEBPB [Search on ENCODE]
ENCSR632DCH_2 K562 Erythroblast Bone Marrow ATF3 [Search on ENCODE]
ENCSR707QWA_1 K562 Erythroblast Bone Marrow NR2F6 [Search on ENCODE]
ENCSR707QWA_2 K562 Erythroblast Bone Marrow NR2F6 [Search on ENCODE]
ENCSR739IHN_2 GM12878 B Lymphocyte Blood TBX21 [Search on ENCODE]
ENCSR750LYM_2 K562 Erythroblast Bone Marrow NR2C2 [Search on ENCODE]
ENCSR835XKS_1 GM12878 B Lymphocyte Blood TRIM22 [Search on ENCODE]
ENCSR874AFU_1 GM12878 B Lymphocyte Blood IKZF1 [Search on ENCODE]
ENCSR874AFU_2 GM12878 B Lymphocyte Blood IKZF1 [Search on ENCODE]
ENCSR908CMW_1 K562 Erythroblast Bone Marrow KDM1A [Search on ENCODE]
ENCSR908CMW_2 K562 Erythroblast Bone Marrow KDM1A [Search on ENCODE]
ENCSR970NKQ_1 K562 Erythroblast Bone Marrow NR2F1 [Search on ENCODE]
ENCSR970NKQ_2 K562 Erythroblast Bone Marrow NR2F1 [Search on ENCODE]
GSM1969223 BT-474 Human Breast Cancer Cell Breast ESRRA [Search on ENCODE]
GSM1844446 Kasumi-1 Myeloblast Blood KDM1A [Search on ENCODE]
GSM1845140 MV4;11 Leukemia Cell Blood BRD4 [Search on ENCODE]
GSM1845137 MV4;11 Leukemia Cell Blood BRD4 [Search on ENCODE]
GSM1845133 MV4;11 Leukemia Cell Blood BRD4 [Search on ENCODE]
GSM2295949 BJAB B Lymphocyte None TRIM28 [Search on ENCODE]
GSM2179743 NB4 Leukemic cells None RUNX1 [Search on ENCODE]
GSM2026061 Kasumi-1 Acute myeloid leukemia None HDAC2 [Search on ENCODE]
GSM2026060 Kasumi-1 Acute myeloid leukemia None HDAC1 [Search on ENCODE]
GSM2026059 Kasumi-1 Acute myeloid leukemia None EP300 [Search on ENCODE]
GSM1420194 None B cell precursor None IKZF1 [Search on ENCODE]
GSM2212239 SEM B Lymphocyte None MED1 [Search on ENCODE]
GSM2364555 None Monocyte Bone Marrow KMT2A [Search on ENCODE]
GSM2364553 None Monocyte Cord blood KMT2A [Search on ENCODE]
GSM2364550 None None Spleen KMT2A [Search on ENCODE]
GSM2212237 SEM B Lymphocyte None BRD4 [Search on ENCODE]
GSM2405928 MV4;11 Acute myeloid leukemia None CDK9 [Search on ENCODE]
GSM2405924 MV4;11 Acute myeloid leukemia None CDK9 [Search on ENCODE]
GSM2574796 GM12878 B Lymphocyte Blood ETV6 [Search on ENCODE]
GSM2466688 DU-528 None Blood MYB [Search on ENCODE]
GSM2466686 LOUCY None Blood MYB [Search on ENCODE]
GSM2628091 GM12878 Lymphoblastoid None RELB [Search on ENCODE]
GSM2295950 BJAB None None MGEA5 [Search on ENCODE]
GSM2410317 SK-N-SH Neuroblastoma cell Brain EBF3 [Search on ENCODE]
GSM2449944 SH-SY5Y Neuron Midbrain PITX3 [Search on ENCODE]
GSM2473253 Raji B Lymphocyte Blood POLR2A [Search on ENCODE]
GSM2771541 HUDEP-2 None None ZBTB7A [Search on ENCODE]
GSM2771543 HUDEP-2 None None ZBTB7A [Search on ENCODE]
GSM2359983 THP-1 Monocyte Blood SPI1 [Search on ENCODE]
GSM2359982 THP-1 Monocyte Blood SPI1 [Search on ENCODE]
GSM2592808 None Macrophage Blood SPI1 [Search on ENCODE]
GSM2664369 CLB-Ga Neuroblastoma cell None PHOX2B [Search on ENCODE]
GSM2592797 None Macrophage Blood CEBPB [Search on ENCODE]
GSM2443453 LCL B Lymphocyte None NIPBL [Search on ENCODE]
GSM2443458 LCL B Lymphocyte None MED1 [Search on ENCODE]
GSM2436677 A673 Polygonal Muscle FLI1 [Search on ENCODE]
GSM2436676 A673 Polygonal Muscle FLI1 [Search on ENCODE]
GSM2394399 JHU-06 Endothelial Cell None CEBPD [Search on ENCODE]
GSM2643541 LCL Lymphoblastoid Blood BRD4 [Search on ENCODE]
GSM2661793 THP-1 Monocyte Blood GLI2 [Search on ENCODE]
GSM2326840 SKH1 SKH-1 cells None RUNX1 [Search on ENCODE]
GSM2664371 CLB-Ga Neuroblastoma cell None HAND2 [Search on ENCODE]
GSM2664370 CLB-Ga Neuroblastoma cell None GATA3 [Search on ENCODE]
GSM831002 K562 Erythroblast Bone Marrow KDM1A [Search on ENCODE]
GSM940322 SEM Pre-B Lymphocyte None MEIS1 [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.