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HBV VIS-Cistrome Factor Overlapped Record Details

This pages show details of Cistrome factor-ralated samples which overlapped this VIS.
The cistrome refers to "the set of cis-acting targets of a trans-acting factor on a genome-wide scale."


Location chr1: 10039-10040 (GRCh38)
GSMID or ENCODE Cell line Cell type Tissue type Factor
GSM1036373 None T Lymphocyte Blood DNase [Search on ENCODE]
GSM1036372 None Natural Killer Cell Blood DNase [Search on ENCODE]
GSM1251564 Reh None None DNase [Search on ENCODE]
GSM1251565 Namalwa B Lymphocyte None DNase [Search on ENCODE]
GSM1581821 None Myeloid Cell None DNase [Search on ENCODE]
GSM1581822 None Myeloid Cell None DNase [Search on ENCODE]
GSM1818000 MUGCHOR None None ATAC-seq [Search on ENCODE]
GSM1818001 UCH2 None Bone ATAC-seq [Search on ENCODE]
GSM1818002 UCH2 None Bone ATAC-seq [Search on ENCODE]
GSM2544231 THP-1 Macrophage None ATAC-seq [Search on ENCODE]
GSM2544230 THP-1 Macrophage None ATAC-seq [Search on ENCODE]
GSM2544229 THP-1 Monocyte None ATAC-seq [Search on ENCODE]
GSM2544227 THP-1 Macrophage None ATAC-seq [Search on ENCODE]
GSM2544226 THP-1 Macrophage None ATAC-seq [Search on ENCODE]
GSM2544225 THP-1 Monocyte None ATAC-seq [Search on ENCODE]
GSM2544224 THP-1 Monocyte None ATAC-seq [Search on ENCODE]
GSM2544222 THP-1 Macrophage None ATAC-seq [Search on ENCODE]
GSM2544220 THP-1 Monocyte None ATAC-seq [Search on ENCODE]
GSM2098984 HFF Fibroblast Foreskin ATAC-seq [Search on ENCODE]
GSM2098983 HFF Fibroblast Foreskin ATAC-seq [Search on ENCODE]
GSM2098982 HFF Fibroblast Foreskin ATAC-seq [Search on ENCODE]
GSM2098981 HFF Fibroblast Foreskin ATAC-seq [Search on ENCODE]
GSM2098980 HFF Fibroblast Foreskin ATAC-seq [Search on ENCODE]
GSM2098979 HFF Fibroblast Foreskin ATAC-seq [Search on ENCODE]
GSM2214075 7250 Fibroblast None DNase [Search on ENCODE]
GSM2264809 C15 hiPSC-derived cells None ATAC-seq [Search on ENCODE]
GSM2264808 C15 hiPSC-derived cells None ATAC-seq [Search on ENCODE]
GSM2411164 Jurkat T Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2411165 Jurkat T Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2411166 Jurkat T Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2411167 Jurkat T Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2411160 Jurkat T Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2411161 Jurkat T Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2411162 Jurkat T Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2411163 Jurkat T Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2676820 J-Lat A72 None None ATAC-seq [Search on ENCODE]
GSM2676821 J-Lat A72 None None ATAC-seq [Search on ENCODE]
GSM2676822 J-Lat A72 None None ATAC-seq [Search on ENCODE]
GSM2264814 C20 hiPSC-derived cells None ATAC-seq [Search on ENCODE]
GSM2264815 C20 hiPSC-derived cells None ATAC-seq [Search on ENCODE]
GSM2264811 C20 hiPS cell None ATAC-seq [Search on ENCODE]
GSM2264819 None hESC None ATAC-seq [Search on ENCODE]
GSM2264830 None hESC None ATAC-seq [Search on ENCODE]
GSM2264831 None hESC None ATAC-seq [Search on ENCODE]
GSM2264832 None hESC None ATAC-seq [Search on ENCODE]
GSM2264824 None hESC None ATAC-seq [Search on ENCODE]
GSM2406695 None Glioblastoma None ATAC-seq [Search on ENCODE]
GSM2579551 None MGE organoids None ATAC-seq [Search on ENCODE]
GSM2218789 None Fibroblast Fetal Skin ATAC-seq [Search on ENCODE]
GSM2218788 None Fibroblast Fetal Skin ATAC-seq [Search on ENCODE]
GSM2218785 None Fibroblast Fetal Skin ATAC-seq [Search on ENCODE]
GSM2218787 None Fibroblast Fetal Skin ATAC-seq [Search on ENCODE]
GSM2218786 None Fibroblast Fetal Skin ATAC-seq [Search on ENCODE]
GSM2705076 None Th17 None ATAC-seq [Search on ENCODE]
GSM2705078 None Treg cell None ATAC-seq [Search on ENCODE]
GSM2411159 Jurkat T Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2411158 Jurkat T Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2411157 Jurkat T Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2411156 Jurkat T Lymphocyte Blood ATAC-seq [Search on ENCODE]
GSM2264805 C15 hiPSC-derived cells None ATAC-seq [Search on ENCODE]
GSM2264806 C15 hiPSC-derived cells None ATAC-seq [Search on ENCODE]
GSM2264803 C15 hiPS cell None ATAC-seq [Search on ENCODE]
GSM2264802 C15 hiPS cell None ATAC-seq [Search on ENCODE]
GSM2264827 None hESC None ATAC-seq [Search on ENCODE]
GSM2264826 None hESC None ATAC-seq [Search on ENCODE]
GSM2264823 None hESC None ATAC-seq [Search on ENCODE]
GSM2264822 None hESC None ATAC-seq [Search on ENCODE]
GSM2264821 None hESC None ATAC-seq [Search on ENCODE]
GSM2264820 None hESC None ATAC-seq [Search on ENCODE]
GSM2425099 H9 Embryonic Stem Cell Embryo ATAC-seq [Search on ENCODE]
GSM2425098 H9 Embryonic Stem Cell Embryo ATAC-seq [Search on ENCODE]
GSM2425097 None Stem cell None ATAC-seq [Search on ENCODE]
GSM2425096 None Stem cell None ATAC-seq [Search on ENCODE]
GSM2425095 None Stem cell None ATAC-seq [Search on ENCODE]
GSM2425094 None Stem cell None ATAC-seq [Search on ENCODE]
GSM2549747 None None Pancreas ATAC-seq [Search on ENCODE]
GSM2549748 None cancer cells Pancreas ATAC-seq [Search on ENCODE]
Contents
Description
  • Overlapped Record Details
An overlapped record means a match between VIS and 1 of 3 Cistrome factor (histone modification, transcription factor binding site and chromatin accessibility), more specifically, this match includes at least 1 overlap between this VIS and 1 Cistrome factor-related sample from 1 of 3 Cistrome factor data. So one VIS may have several overlaps with multiple Cistrome factor-related samples, the associated factor and overlap amount of samples could indicate that the virus integration site is a potentially functional DNA element.