HPV VIS Detail Information

> This page shows VIS [5402617] detail information, including site information (chromosome, GRCh38 location, disease, sample, etc) and literature information.

Site Information

DVID	5402617
Chromosome	chr9
GRCh38 Location	99955163
Disease	Head and neck squamous cell carcinoma
Sample	tumor
Target Gene	STX17

Literature Information

PubMed PMID	32025001
Published year	2020
Journal	Nature genetics
Title	The landscape of viral associations in human cancers.
Author	Zapatka M,Borozan I,Brewer DS,Iskar M,Grundhoff A,Alawi M,Desai N,Sültmann H,Moch H,PCAWG Pathogens.,Cooper CS,Eils R,Ferretti V,Lichter P,PCAWG Consortium.
Evidence	For HBV, HPV16, HPV18 and adeno-associated virus-2 (AAV2), viral integration was associated with local variations in genomic copy numbers. Integrations at the TERT promoter were associated with high telomerase expression evidently activating this tumor-driving process. High levels of endogenous retrovirus (ERV1) expression were linked to a worse survival outcome in patients with kidney cancer.