HIV VIS Detail Information

> This page shows VIS [4000957] detail information, including site information (chromosome, GRCh38 location, disease, sample, etc) and literature information.


Site Information
DVID 4000957
VISID TVIS30001206
Chromosome chr6
GRCh38 Location 30712497, 30713408
Disease HIV infection/AIDS  
Sample PBMC
Virus Reference Genome Not given
Target Gene MDC1     
Literature Information
PubMed PMID 25011556
Published year 2014
Journal Science (New York, N.Y.)
Title HIV latency. Proliferation of cells with HIV integrated into cancer genes contributes to persistent infection.
Author Wagner TA,McLaughlin S,Garg K,Cheung CY,Larsen BB,Styrchak S,Huang HC,Edlefsen PT,Mullins JI,Frenkel LM
Evidence We evaluated the contribution of infected-cell proliferation and sites of proviral integration to HIV persistence. A total of 534 HIV integration sites (IS) and 63 adjacent HIV env sequences were derived from three study participants over 11. Each participant had identical viral sequences integrated at the same position in multiple cells, demonstrating infected-cell proliferation. Integrations were overrepresented in genes associated with cancer and favored in 12 genes across multiple participants. HIV integration into specific genes may promote proliferation of HIV-infected cells, slowing viral decay during ART.

Contents
Description
  • Site Information
Detail information of site [4000957]
  • Literature Information
The details of literature that this site is associated with.