DVID
|
4000627 |
VISID
|
TVIS30005964
|
Chromosome
|
chr11 |
GRCh38 Location
|
108289844 |
Disease
|
HIV infection/AIDS |
Sample
|
Cell line |
Virus Reference Genome
|
Not given |
Target Gene
|
ATM |
Literature Information
PubMed PMID
|
23953889
|
Published year
|
2013 |
Journal
|
Retrovirology |
Title
|
HIV latency and integration site placement in five cell-based models. |
Author
|
Sherrill-Mix S,Lewinski MK,Famiglietti M,Bosque A,Malani N,Ocwieja KE,Berry CC,Looney D,Shan L,Agosto LM,Pace MJ,Siliciano RF,O'Doherty U,Guatelli J,Planelles V,Bushman FD |
Evidence
|
BACKGROUND: HIV infection can be treated effectively with antiretroviral agents, but the persistence of a latent reservoir of integrated proviruses prevents eradication of HIV from infected individuals. The chromosomal environment of integrated proviruses has been proposed to influence HIV latency, but the determinants of transcriptional repression have not been fully clarified, and it is unclear whether the same molecular mechanisms drive latency in different cell culture models. Cells were infected in vitro and separated into fractions containing proviruses that were either expressed or silent/inducible, and integration site populations sequenced from each.
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