EBV VIS Detail Information

> This page shows VIS [3000641] detail information, including site information (chromosome, GRCh38 location, disease, sample, etc) and literature information.


Site Information
DVID 3000641
VISID TVIS42001143
Chromosome chr4
GRCh38 Location 148980
Disease B-cell lymphoma  
Sample Cell line
Virus Reference Genome V01555
Literature Information
PubMed PMID 15681063
Published year 2005
Journal Virus research
Title Identification of Epstein-Barr virus integrated sites in lymphoblastoid cell line (IB4).
Author Takakuwa T,Luo WJ,Ham MF,Wada N,Aozasa K
Evidence Previous study indicated that EBV whole genome is integrated tandemly as the linear viral genome into host genome of IB4, although sites of integration have not been determined. Through cloning of the junctional regions between EBV and host genomes, one of the integration sites was identified on the BamHI-C fragments around oriP sequences and another on the EcoRI-I fragment. Both of the integration sites were located on the clone RP11-119H12 of chromosome 4q25 and separated approximately 6. The integration sites identified were apart from the genes of the host genome, indicating that both host gene and EBV latent genes are not altered by the integration event.

Contents
Description
  • Site Information
Detail information of site [3000641]
  • Literature Information
The details of literature that this site is associated with.