HBV VIS Detail Information

> This page shows VIS [1400205] detail information, including site information (chromosome, GRCh38 location, disease, sample, etc) and literature information.

Site Information

Literature Information

PubMed PMID	30704462
Published year	2019
Journal	BMC medical genomics
Title	Detecting virus integration sites based on multiple related sequencing data by VirTect.
Author	Xia Y,Liu Y,Deng M,Xi R
Evidence	We develop VirTect for detecting virus integration sites simultaneously from multiple related-sample data. This algorithm is mainly based on the joint analysis of short reads spanning breakpoints of integration sites from multiple samples. To achieve high specificity and breakpoint accuracy, a local precise sandwich alignment algorithm is used. Simulation and real data analyses show that, compared with other algorithms, VirTect is significantly more sensitive and has a similar or lower false discovery rate.