HBV VIS Detail Information

> This page shows VIS [1100072] detail information, including site information (chromosome, GRCh38 location, disease, sample, etc) and literature information.


Site Information
DVID 1100072
Chromosome chr10
GRCh38 Location 51769849, 51769877
Disease Hepatocellular carcinoma  
Sample Cell line
Virus Reference Genome X72702
Target Gene PRKG1     
Literature Information
PubMed PMID 31064734
Published year 2019
Journal Cancer genetics
Title Retrotransposon elements among initial sites of hepatitis B virus integration into human genome in the HepG2-NTCP cell infection model.
Author Chauhan R,Shimizu Y,Watashi K,Wakita T,Fukasawa M,Michalak TI
Evidence At one-hour p.i., HBV integration with retrotransposon THE-1B-LTR was identified, while virus insertions into proline-rich protein and protein kinase cGMP-dependent type 1 encoding genes were found at 3 h p.i. Fusion with runt-related transcription factor 1 was detected at 24 h p.i. and merges with 9 different genes at 13 day p.i.

Contents
Description
  • Site Information
Detail information of site [1100072]
  • Literature Information
The details of literature that this site is associated with.