HBV VIS Detail Information

> This page shows VIS [1012681] detail information, including site information (chromosome, GRCh38 location, disease, sample, etc) and literature information.


Site Information
DVID 1012681
VISID TVIS10006899
Chromosome chr17
GRCh38 Location 11524480
Disease Hepatocellular carcinoma  
Sample Tumor
Virus Reference Genome JQ688405
Target Gene SHISA6     
Literature Information
PubMed PMID 25627239
Published year 2015
Journal Hepatology (Baltimore, Md.)
Title Characterization of the genotype and integration patterns of hepatitis B virus in early- and late-onset hepatocellular carcinoma.
Author Yan H,Yang Y,Zhang L,Tang G,Wang Y,Xue G,Zhou W,Sun S
Evidence Here, we report a comparative study of HBV subgenotypes and integration in early- (/=70) HBV-associated HCC using a novel high-throughput viral integration detection method. HBV integration is a common phenomenon, both in early- and late-onset HCC, which favors integrating into human repeat regions. HBV integrating this site results in c-MYC, PVT1, and microRNA-1204 overexpression in tumors, thereby potentially contributing to the development of early-onset HCC. CONCLUSION: HBV genotype and integration patterns may be distinct in early-onset HCC. Further studies are needed to elucidate at which time in tumor development this integration event occurs and whether it plays an important, causative role in HCC development or progression.

Contents
Description
  • Site Information
Detail information of site [1012681]
  • Literature Information
The details of literature that this site is associated with.