HBV Target gene Detail Information

> ZNF652 Gene Search Result


Gene Information
Gene Name ZNF652
Gene ID 22834
Gene Full Name zinc finger protein 652
Transcripts ENSG00000198740
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins, Transcription factors
Uniport_ID Q9Y2D9
HGNC ID HGNC:29147
VEGA ID OTTHUMG00000161322
OMIM ID 613907
String ID 9606.ENSP00000354686
PharmGKB ID PA134896615
Target gene [ZNF652] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1010232 chr17 6 7 13 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ZNF652 expression and immune infiltrating cell level correlation result in HBV+ samples
ZNF652 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).