HBV Target gene Detail Information

> ZFYVE1 Gene Search Result


Gene Information
Gene Name ZFYVE1
Gene ID 53349
Gene Full Name zinc finger FYVE-type containing 1
Gene Alias SR3; DFCP1; TAFF1; ZNFN2A1; PPP1R172
Transcripts ENSG00000165861
Virus HBV
Gene Type protein coding
HPA Location Info Endoplasmic reticulum;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q9HBF4
HGNC ID HGNC:13180
VEGA ID OTTHUMG00000171365
OMIM ID 605471
String ID 9606.ENSP00000450742
PharmGKB ID PA37752
Target gene [ZFYVE1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1013521 chr14 2 2 1 5 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ZFYVE1 expression and immune infiltrating cell level correlation result in HBV+ samples
ZFYVE1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).