HIV Target gene Detail Information

> SETDB2 Gene Search Result


Gene Information
Gene Name SETDB2
Gene ID 83852
Gene Full Name SET domain bifurcated 2
Gene Alias CLLD8; CLLL8; KMT1F; C13orf4
Transcripts ENSG00000136169
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Enzymes, Plasma proteins, Predicted intracellular proteins
Uniport_ID Q96T68
HGNC ID HGNC:20263
VEGA ID OTTHUMG00000016918
OMIM ID 607865
String ID 9606.ENSP00000346175
PharmGKB ID PA134956285
Target gene [SETDB2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000783 chr13 263 5 15 283 View
4002082 chr13 101 8 4 113 View
4009106 chr13 12 12 View
4010234 chr13 9 9 View
4013854 chr13 3 3 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).