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HPV Target gene Detail Information

> PVT1 Gene Search Result


Gene Information
Gene Name PVT1
Gene ID 5820
Gene Alias LINC00079; MIR1204HG; NCRNA00079; onco-lncRNA-100
Transcripts ENSG00000249859
Virus HPV
Gene Type ncRNA
HPA Location Info
Gene Function Oncogene
HGNC ID HGNC:9709
VEGA ID OTTHUMG00000164871
OMIM ID 165140
lncRNASNP2 ID NONHSAG051258.2
PharmGKB ID PA34053
Target gene [PVT1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5000629 chr8 59 22 33 114 View
5001152 chr8 1 34 12 47 View
5001228 chr8 38 4 42 View
5001422 chr8 12 21 1 34 View
5002694 chr8 5 3 8 View
5200203 chr8 46 87 1 134 View
5300448 chr8 19 6 25 View
5300449 chr8 1 3 4 View
5300450 chr8 60 101 190 351 View
5300451 chr8 7 7 View
5300452 chr8 201 11 20 232 View
5300453 chr8 44 39 83 View
5300454 chr8 13 13 View
5300455 chr8 65 70 26 161 View
5402638 chr8 130 1 131 View
5402639 chr8 73 6 79 View
5402640 chr8 78 3 81 View
5402641 chr8 16 16 View
5402642 chr8 50 5 55 View
5402643 chr8 12 15 1 28 View
5402644 chr8 9 11 20 View
5402645 chr8 2 2 View
5402646 chr8 1 4 11 16 View
5402647 chr8 27 4 16 47 View
5402870 chr8 17 1 22 40 View
5403055 chr8 180 2 182 View
5403230 chr8 3 3 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).