HIV Target gene Detail Information

> PRDM2 Gene Search Result


Gene Information
Gene Name PRDM2
Gene ID 7799
Gene Full Name PR/SET domain 2
Gene Alias RIZ; KMT8; RIZ1; RIZ2; KMT8A; MTB-ZF; HUMHOXY1
Transcripts ENSG00000116731
Virus HIV
Gene Type protein coding
HPA Location Info Golgi apparatus;Nucleoplasm;
HPA Protein Class Info Enzymes, Predicted intracellular proteins, Transcription factors
Gene Function Suppressor gene
Uniport_ID Q13029
HGNC ID HGNC:9347
VEGA ID OTTHUMG00000007917
OMIM ID 601196
String ID 9606.ENSP00000235372
PharmGKB ID PA33715
Target gene [PRDM2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000461 chr1 409 31 7 447 View
4000905 chr1 234 11 5 250 View
4002138 chr1 7 87 16 110 View
4005873 chr1 8 10 11 29 View
4005874 chr1 8 10 11 29 View
4006291 chr1 7 8 11 26 View
4006292 chr1 7 8 11 26 View
4006614 chr1 1 22 23 View
4006615 chr1 1 22 23 View
4008471 chr1 12 3 15 View
4008744 chr1 8 3 3 14 View
4009504 chr1 8 3 11 View
4009793 chr1 5 1 4 10 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).