HIV Target gene Detail Information

> LMO7 Gene Search Result

Gene Information

Gene Name	LMO7
Gene ID	4008
Gene Full Name	LIM domain 7
Gene Alias	LOMP; FBX20; LMO7b; FBXO20
Transcripts	ENSG00000136153
Virus	HIV
Gene Type	protein coding
HPA Location Info	Actin filaments;Cytosol;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	Q8WWI1
HGNC ID	HGNC:6646
VEGA ID	OTTHUMG00000017093
OMIM ID	604362
String ID	9606.ENSP00000433352
PharmGKB ID	PA30412

Target gene [LMO7] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000384	chr13	106	178	229	513	View
4000387	chr13	106	177	229	512	View
4003011	chr13	71	1		72	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of LMO7 expression and immune infiltrating cell level correlation result in HIV+ samples
LMO7 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).