HIV Target gene Detail Information

> CHD1 Gene Search Result


Gene Information
Gene Name CHD1
Gene ID 1105
Gene Full Name chromodomain helicase DNA binding protein 1
Gene Alias CHD-1; PILBOS
Transcripts ENSG00000153922
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoli fibrillar center;Nucleoplasm;
HPA Protein Class Info Disease related genes, Enzymes, FDA approved drug targets, Predicted intracellular proteins
Gene Function Suppressor gene
Uniport_ID O14646
HGNC ID HGNC:1915
VEGA ID OTTHUMG00000162744
OMIM ID 602118
String ID 9606.ENSP00000483667
PharmGKB ID PA26451
Target gene [CHD1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000180 chr18 42 431 338 811 View
4001749 chr5 129 4 2 135 View
4003977 chr18 33 18 51 View
4004219 chr18 47 47 View
4008007 chr18 9 8 17 View
4010151 chr18 9 9 View
4010962 chr18 8 8 View
4012925 chr18 2 1 1 4 View
4013103 chr18 2 2 4 View
4014170 chr18 1 1 2 View
4014717 chr18 1 1 2 View
4014718 chr18 2 2 View
4014776 chr5 2 2 View
4016255 chr18 0 View
4100022 chr5 65 65 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).