HIV Target gene Detail Information

> C1orf43 Gene Search Result


Gene Information
Gene Name C1orf43
Gene ID 25912
Gene Full Name chromosome 1 open reading frame 43
Gene Alias NICE3; NICE-3; S863-3; HSPC012; NS5ATP4
Transcripts ENSG00000143612
Virus HIV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q9BWL3
HGNC ID HGNC:29876
VEGA ID OTTHUMG00000035981
OMIM ID 617428
String ID 9606.ENSP00000357507
PharmGKB ID PA134961848
Target gene [C1orf43] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000518 chr1 59 129 216 404 View
4001315 chr1 179 179 View
4002405 chr1 93 2 1 96 View
4009884 chr1 8 2 10 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).