Virus Dataset Sample Info

> Dataset: 33654530 Search Result


Summary
Item Summary
Project 33654530
Virus Name HIV
Sample Number 50
Disease HIV infection/AIDS
Country Kenya
Data Link https://www.ncbi.nlm.nih.gov/nuccore/?term=MT853184:MT853216[pacc]
https://www.ncbi.nlm.nih.gov/nuccore/?term=MT957068:MT957082[pacc]

Sample
ID Sample ID Age Gender Origin Detail
1 001K 20 M Kenya View
2 2K 42 F Kenya View
3 3K 59 F Kenya View
4 4K 18 F Kenya View
5 05K 41 M Kenya View
6 06K 20 F Kenya View
7 07K 21 M Kenya View
8 08K 18 F Kenya View
9 09K 20 F Kenya View
10 10K 18 M Kenya View
11 11K 36 F Kenya View
12 12K 27 F Kenya View
13 13K 45 M Kenya View
14 14K 23 F Kenya View
15 15K 33 F Kenya View
16 16K 46 F Kenya View
17 17K 23 F Kenya View
18 18K 18 F Kenya View
19 19K 24 F Kenya View
20 20K 43 F Kenya View
21 21K 49 F Kenya View
22 22K 23 M Kenya View
23 23K 19 M Kenya View
24 24K 31 F Kenya View
25 25K 53 F Kenya View
26 26K 20 M Kenya View
27 27K 20 F Kenya View
28 28K 43 F Kenya View
29 29K 27 F Kenya View
30 30K 36 F Kenya View
31 31K 21 F Kenya View
32 32K 34 F Kenya View
33 33K 41 F Kenya View
34 34K 18 F Kenya View
35 35K 30 F Kenya View
36 36K 18 M Kenya View
37 37K 18 F Kenya View
38 38K 18 F Kenya View
39 39K 18 M Kenya View
40 40K 38 F Kenya View
41 41K 47 M Kenya View
42 42K 33 M Kenya View
43 43K 25 F Kenya View
44 44K 18 M Kenya View
45 45K 23 F Kenya View
46 46K 38 F Kenya View
47 47K 47 M Kenya View
48 48K 18 M Kenya View
49 49K 18 M Kenya View
50 50K 28 F Kenya View

Literature
Item Summary
PMID 33654530
Title Prevalence of human immunodeficiency virus-1 drug-resistant mutations among adults on first- and second-line antiretroviral therapy in a resource-limited health facility in Busia County, Kenya.
Abstract Introduction: in Kenya, about 1.5 million people are living with the Human Immunodeficiency Virus (HIV). Antiretroviral therapy aids in viral suppression. However, drug-resistance threaten the gains of the HIV infection control program. To determine the prevalence of HIV-1 drug-resistant mutations among adults on ARV therapy attending Khunyangu sub-county hospital in Busia County, Kenya, 50 blood samples were analyzed. Methods: the samples were collected from November 2019 to January 2020 and tested for HIV-1 viral load. HIV-1 drug-resistance was analyzed through the sequencing of the HIV-1 pol gene. Generated sequences were aligned using RECall (beta v3.05) software. HIV-1 drug-resistance was determined using the Stanford University HIV database. Results: females were 34 and males 16. The general prevalence of HIV-1 drug-resistance was 68%. Out of 34 participants on first-line drugs, 59.9% had mutations against these drugs and 5.9% against the second-line drugs. Out of 16 participants on second-line drugs, 43.8% had mutations against these drugs and 50% against the first-line drugs. The prevalence of mutations encoding resistance to Nucleotide reverse transcriptase inhibitors (NRTIs) were 23(46%); Non-nucleotide Reverse transcriptase inhibitors (NNRTIs), 29(58%) and protease inhibitors (PIs), 7(14%). Dual and multi-class HIV-1 drug-resistance prevalence was as follows: NRTIs + NNRTIs 16(32%); NRTIs + NNRTs + PIs 4(8%); NRTIs + PIs 1(2%). A total of 126 mutations were identified. Predominant NNRTIs mutations were K103N (15), Y181C (9), G190A (7), and H221Y (6) NRTIs, M184V (17), Y115F (5) and PIs, I54V (4). Conclusion: the study demonstrates a high prevalence of HIV-1 drug-resistance which calls for intervention for the strengthening of health programs.