Virus Dataset Sample Info

> Dataset: 14712219 Search Result


Summary
Item Summary
Project 14712219
Virus Name HBV
Sample Number 14
Disease Hepatocellular carcinoma (HCC)
Country China

Sample
ID Sample ID Age Gender Origin Detail
1 H5 47 M China View
2 H16 45 M China View
3 H17 40 M China View
4 H21 51 M China View
5 H28 63 M China View
6 H31 45 M China View
7 H37 62 M China View
8 H38 37 M China View
9 H41 35 F China View
10 H42 49 F China View
11 H44 17 F China View
12 H51 45 M China View
13 H58 49 M China View
14 H59 71 M China View

Literature
Item Summary
PMID 14712219
Title Characterization of HBV Integrants in 14 Hepatocellular Carcinomas: Association of Truncated X Gene and Hepatocellular Carcinogenesis
Abstract Although the integration of hepatitis B virus (HBV) into human DNA has been found to be associated with the development of hepatocellular carcinoma (HCC), the molecular mechanism remains unclear. In order to obtain additional insight into the correlation of HBV integration and HCC development, integrated HBV in 14 primary HCC cases was isolated and characterized by sequencing analysis. Our findings in this study showed that: (1) none of the known cellular oncogene or tumor suppressor gene was affected by the HBV integration; (2) although the integration of HBV is random, the integration site was often within or close to human repetitive sequences; (3) integrated HBV may possess the capacity to transpose to another chromosome region through reintegration; (4) rearrangements of HBV sequence were observed in all the 14 integrants, involving (most frequently) X (12/14 integrants), P (8/14), S (7/14), and C (7/14) genes; and (5) 3'-deleted X gene and consequent C-terminal truncated X protein caused by HBV integration was observed in 10 cases. These deletions cause the losses of p53-dependent transcriptional repression binding site, transcription factor Sp1 binding site, and growth-suppressive effect domain, leading to cell proliferation and transformation. This finding suggests that 3'-deleted X gene caused by the HBV integration may play an important role in the HCC development.