Overview of HIV associated HIV infection/AIDS

Human immunodeficiency virus infection is a spectrum of conditions caused by infection with the human immunodeficiency virus (HIV). Following initial infection a person may not notice any symptoms, or may experience a brief period of influenza-like illness. Typically, this is followed by a prolonged period with no symptoms. Acquired immunodeficiency syndrome (AIDS) is defined as an HIV infection with either a CD4+ T cell count below 200 cells per µL or the occurrence of specific diseases associated with HIV infection.

ID	Literature	Title	Group
1	17262715	Recurrent HIV-1 integration at the BACH2 locus in resting CD4+ T cell populations during effective highly active antiretroviral therapy.	VIS-cistrome
2	23953889	HIV latency and integration site placement in five cell-based models.	VIS-cistrome
3	24968937	HIV latency. Specific HIV integration sites are linked to clonal expansion and persistence of infected cells.	VIS-cistrome
4	15163705	Resting CD4+ T cells from human immunodeficiency virus type 1 (HIV-1)-infected individuals carry integrated HIV-1 genomes within actively transcribed host genes.	VIS-cistrome
5	26912621	HIV Integration Site Analysis of Cellular Models of HIV Latency with a Probe-Enriched Next-Generation Sequencing Assay.	VIS-cistrome
6	25011556	HIV latency. Proliferation of cells with HIV integrated into cancer genes contributes to persistent infection.	VIS-cistrome
7	30024859	HIV-1 proviral landscapes distinguish posttreatment controllers from noncontrollers.	VIS-cistrome
8	30688658	Intact HIV-1 proviruses accumulate at distinct chromosomal positions during prolonged antiretroviral therapy.	VIS-cistrome
9	12843741	HIV insertions within and proximal to host cell genes are a common finding in tissues containing high levels of HIV DNA and macrophage-associated p24 antigen expression.	VIS-cistrome
10	28086908	HIV integration sites in latently infected cell lines: evidence of ongoing replication.	VIS-cistrome
11	31776247	Combined HIV-1 sequence and integration site analysis informs viral dynamics and allows reconstruction of replicating viral ancestors.	VIS-cistrome
12	31217357	Clones of infected cells arise early in HIV-infected individuals.	VIS-cistrome
13	33318172	HIV proviral DNA integration can drive T cell growth ex vivo.	VIS-cistrome
14	33823910	PCIP-seq: simultaneous sequencing of integrated viral genomes and their insertion sites with long reads.	VIS-cistrome

Contents
Description

Group Note

Mutation Tag: literature about this virus mutation and click the eye icon to see detail mutation information in literature
VIS-cistrome Tag: literature associated this virus integration and click the eye icon to see detail information of 3 cistrome factors (histone modification, transcription factor binding site and chromatin accessibility)