HBV Target gene Detail Information

> ZSCAN5A Gene Search Result


Gene Information
Gene Name ZSCAN5A
Gene ID 79149
Gene Full Name zinc finger and SCAN domain containing 5A
Gene Alias ZNF495; ZSCAN5
Transcripts ENSG00000131848
Virus HBV
Gene Type protein coding
HPA Location Info Nuclear speckles;
HPA Protein Class Info Predicted intracellular proteins, Transcription factors
Uniport_ID Q9BUG6
HGNC ID HGNC:23710
VEGA ID OTTHUMG00000181883
String ID 9606.ENSP00000375593
PharmGKB ID PA162411030
Target gene [ZSCAN5A] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1002306 chr19 161 57 78 296 View
1006147 chr19 41 1 42 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ZSCAN5A expression and immune infiltrating cell level correlation result in HBV+ samples
ZSCAN5A expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).