HIV Target gene Detail Information

> ZSCAN25 Gene Search Result


Gene Information
Gene Name ZSCAN25
Gene ID 221785
Gene Full Name zinc finger and SCAN domain containing 25
Gene Alias ZNF498
Transcripts ENSG00000197037
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoli fibrillar center;Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins, Transcription factors
Uniport_ID Q6NSZ9
HGNC ID HGNC:21961
VEGA ID OTTHUMG00000074055
String ID 9606.ENSP00000377708
PharmGKB ID PA134962723
Target gene [ZSCAN25] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000092 chr7 97 686 369 1152 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of ZSCAN25 expression and immune infiltrating cell level correlation result in HIV+ samples
ZSCAN25 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).