HIV Target gene Detail Information

> ZSCAN22 Gene Search Result


Gene Information
Gene Name ZSCAN22
Gene ID 342945
Gene Full Name zinc finger and SCAN domain containing 22
Gene Alias HKR2; ZNF50
Transcripts ENSG00000182318
Virus HIV
Gene Type protein coding
HPA Location Info Cytosol;Plasma membrane;Actin filaments;
HPA Protein Class Info Predicted intracellular proteins, Transcription factors
Uniport_ID P10073
HGNC ID HGNC:4929
VEGA ID OTTHUMG00000183463
OMIM ID 165260
String ID 9606.ENSP00000332433
PharmGKB ID PA29307
Target gene [ZSCAN22] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4014617 chr19 1 1 2 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of ZSCAN22 expression and immune infiltrating cell level correlation result in HIV+ samples
ZSCAN22 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).