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HTLV1 Target gene Detail Information

> ZSCAN10 Gene Search Result


Gene Information
Gene Name ZSCAN10
Gene ID 84891
Gene Full Name zinc finger and SCAN domain containing 10
Gene Alias ZNF206
Transcripts ENSG00000130182
Virus HTLV1
Gene Type protein coding
HPA Location Info Nucleoplasm;Centrosome;
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins, Transcription factors
Uniport_ID Q96SZ4
HGNC ID HGNC:12997
VEGA ID OTTHUMG00000177478
OMIM ID 618365
String ID 9606.ENSP00000252463
PharmGKB ID PA162410957
Target gene [ZSCAN10] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6005748 chr16 61 14 5 80 View
6005931 chr16 60 13 4 77 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE55851 (GEO) Adult T-cell leukemia 21 Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)
GSE29312 (GEO) HTLV-1 associated myelopathy 39 Normal (9), Asymptomatic carriers (HTLV1+)(20), HTLV-1-associated myelopathy (HTLV1+)(10)

> Dataset: GSE55851

HeatMap of cell type fractions in all samples Lollipop of ZSCAN10 expression and immune infiltrating cell level correlation result in HTLV1+ samples
ZSCAN10 expression: Low -> High

> Dataset: GSE29312

HeatMap of cell type fractions in all samples Lollipop of ZSCAN10 expression and immune infiltrating cell level correlation result in HTLV1+ samples
ZSCAN10 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).