HTLV1 Target gene Detail Information

> ZNF846 Gene Search Result


Gene Information
Gene Name ZNF846
Gene ID 162993
Transcripts ENSG00000196605
Virus HTLV1
Gene Type protein coding
HPA Location Info Actin filaments;
HPA Protein Class Info Predicted intracellular proteins, Transcription factors
Uniport_ID Q147U1
HGNC ID HGNC:27260
VEGA ID OTTHUMG00000180208
String ID 9606.ENSP00000380999
PharmGKB ID PA162410876
Target gene [ZNF846] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6013919 chr19 18 18 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE55851 (GEO) Adult T-cell leukemia 21 Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)

> Dataset: GSE55851

HeatMap of cell type fractions in all samples Lollipop of ZNF846 expression and immune infiltrating cell level correlation result in HTLV1+ samples
ZNF846 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).