HBV Target gene Detail Information

> ZNF830 Gene Search Result


Gene Information
Gene Name ZNF830
Gene ID 91603
Gene Full Name zinc finger protein 830
Gene Alias OMCG1; CCDC16
Transcripts ENSG00000198783
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q96NB3
HGNC ID HGNC:28291
VEGA ID OTTHUMG00000179771
String ID 9606.ENSP00000354518
PharmGKB ID PA162410767
Target gene [ZNF830] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1401519 chr17 4338 601 312 5251 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ZNF830 expression and immune infiltrating cell level correlation result in HBV+ samples
ZNF830 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).