HBV Target gene Detail Information

> ZNF827 Gene Search Result


Gene Information
Gene Name ZNF827
Gene ID 152485
Gene Full Name zinc finger protein 827
Transcripts ENSG00000151612
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins, Transcription factors
Uniport_ID Q17R98
HGNC ID HGNC:27193
VEGA ID OTTHUMG00000161362
OMIM ID 617962
String ID 9606.ENSP00000368761
PharmGKB ID PA162410714
Target gene [ZNF827] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1002381 chr4 60 146 77 283 View
1017224 chr4 1 1 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ZNF827 expression and immune infiltrating cell level correlation result in HBV+ samples
ZNF827 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).