HBV Target gene Detail Information

> ZNF676 Gene Search Result


Gene Information
Gene Name ZNF676
Gene ID 163223
Gene Full Name zinc finger protein 676
Transcripts ENSG00000276219
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins, Transcription factors
Uniport_ID Q8N7Q3
HGNC ID HGNC:20429
VEGA ID OTTHUMG00000178069
String ID 9606.ENSP00000380310
PharmGKB ID PA142670477
Target gene [ZNF676] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1016182 chr19 1 1 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ZNF676 expression and immune infiltrating cell level correlation result in HBV+ samples
ZNF676 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).