HIV Target gene Detail Information

> ZNF607 Gene Search Result


Gene Information
Gene Name ZNF607
Gene ID 84775
Gene Full Name zinc finger protein 607
Transcripts ENSG00000198182
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins, Transcription factors
Uniport_ID Q96SK3
HGNC ID HGNC:28192
VEGA ID OTTHUMG00000182108
String ID 9606.ENSP00000347338
PharmGKB ID PA134938252
Target gene [ZNF607] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4009385 chr19 11 1 12 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of ZNF607 expression and immune infiltrating cell level correlation result in HIV+ samples
ZNF607 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).