HIV Target gene Detail Information

> ZNF563 Gene Search Result

Gene Information

Gene Name	ZNF563
Gene ID	147837
Gene Full Name	zinc finger protein 563
Transcripts	ENSG00000188868
Virus	HIV
Gene Type	protein coding
HPA Location Info	Vesicles;
HPA Protein Class Info	Predicted intracellular proteins, Transcription factors
Uniport_ID	Q8TA94
HGNC ID	HGNC:30498
VEGA ID	OTTHUMG00000156413
String ID	9606.ENSP00000293725
PharmGKB ID	PA134949077

Target gene [ZNF563] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4004951	chr19	37			37	View
4006279	chr19	24	2		26	View
4007669	chr19	18			18	View
4013887	chr19	1	2		3	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of ZNF563 expression and immune infiltrating cell level correlation result in HIV+ samples
ZNF563 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).