HBV Target gene Detail Information

> ZNF483 Gene Search Result


Gene Information
Gene Name ZNF483
Gene ID 158399
Gene Full Name zinc finger protein 483
Gene Alias ZSCAN48; ZKSCAN16
Transcripts ENSG00000173258
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoli;
HPA Protein Class Info Cancer-related genes, Plasma proteins, Predicted intracellular proteins, Transcription factors
Uniport_ID Q8TF39
HGNC ID HGNC:23384
VEGA ID OTTHUMG00000020490
String ID 9606.ENSP00000311679
PharmGKB ID PA134897404
Target gene [ZNF483] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1007126 chr9 16 14 30 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ZNF483 expression and immune infiltrating cell level correlation result in HBV+ samples
ZNF483 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).