HTLV1 Target gene Detail Information

> ZNF33A Gene Search Result


Gene Information
Gene Name ZNF33A
Gene ID 7581
Gene Full Name zinc finger protein 33A
Gene Alias KOX2; KOX5; KOX31; NF11A; ZNF11; ZNF33; ZZAPK; ZNF11A
Transcripts ENSG00000189180
Virus HTLV1
Gene Type protein coding
HPA Location Info Endoplasmic reticulum;Nucleoli fibrillar center;Vesicles;
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins, Transcription factors
Uniport_ID Q06730
HGNC ID HGNC:13096
VEGA ID OTTHUMG00000017983
OMIM ID 194521
String ID 9606.ENSP00000304268
PharmGKB ID PA37671
Target gene [ZNF33A] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6002974 chr10 193 1 194 View
6007563 chr10 47 2 5 54 View
6014268 chr10 1 4 12 17 View
6014269 chr10 1 4 12 17 View
6019297 chr10 7 1 8 View
6020635 chr10 6 6 View
6021607 chr10 6 6 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE55851 (GEO) Adult T-cell leukemia 21 Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)
GSE29312 (GEO) HTLV-1 associated myelopathy 39 Normal (9), Asymptomatic carriers (HTLV1+)(20), HTLV-1-associated myelopathy (HTLV1+)(10)
GSE29332 (GEO) HTLV-1 associated myelopathy 35 Normal (8), Asymptomatic carriers (HTLV1+)(17), HTLV-1-associated myelopathy (HTLV1+)(10)

> Dataset: GSE55851

HeatMap of cell type fractions in all samples Lollipop of ZNF33A expression and immune infiltrating cell level correlation result in HTLV1+ samples
ZNF33A expression: Low -> High

> Dataset: GSE29312

HeatMap of cell type fractions in all samples Lollipop of ZNF33A expression and immune infiltrating cell level correlation result in HTLV1+ samples
ZNF33A expression: Low -> High

> Dataset: GSE29332

HeatMap of cell type fractions in all samples Lollipop of ZNF33A expression and immune infiltrating cell level correlation result in HTLV1+ samples
ZNF33A expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).